| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002114 |
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| Symbol | |
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| ID | 8555769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 535957 |
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| End bp | 536673 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646405133 |
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| Product | 2-haloalkanoic acid dehalogenase |
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| Protein accession | YP_003284742 |
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| Protein GI | 262392888 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTT ATCGCCGTAT CGAGCCTATT AAGGCCATGA CCTTCGATCT TGATGACACG
CTGTATGACA ATTACCCGGT GATTATCCGT ATGGAGCGTG AGTTGCTGGC TTGGTTGCAG
CAAACACATC CTGCCGTGGC GCACATGGAT AAGGCTGATT GGATGCAGGT AAAAAAACAT
GTGCTCCAGC AGAGACCGGA TCTCAGAAGC GATGTGACGC TTTGGCGTTT AGTGCAGCTA
AAGCATGGTT TTCTTTCAGT TGGCTATGAT GAAGCTCAAG CTCAAGCCGC AGCTGAAGAG
GGTGTGCAGC TCGCTTTGGA TTGGCGCAGT CAGTTTGAAG TGCCCCAATC AAGCTTAGAT
GTTTTGACAC AACTGGGAGA GCGAGTTCCG CTCGTGGCGA TCACAAACGG CAACGTCGAT
TTAGATAAAA TTGGCTTAAC GCCATATTTT CAATGTGTAC TCAAAGCGGG GCCAGATGGG
TTAGCGAAAC CCGCCACCGA TATGTTTACT AAGGCGAAAC GGTTCTTGGA TATTCCAGCA
GAGAATATTC TGCATGTCGG TGATCACCTA ACCACGGATG TGCATGGTGC AAAGTCGGCT
GGTTTTGCGG CTTGTTGGTT CAATGATATG AATAAAAATG TCATTAACCA TTCAAAAACA
CGTACTTTAC CTGATATTGA AATCAATAGT TTGCAGCCGT TACTCACACT TTTTTAA
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| Protein sequence | MKFYRRIEPI KAMTFDLDDT LYDNYPVIIR MERELLAWLQ QTHPAVAHMD KADWMQVKKH
VLQQRPDLRS DVTLWRLVQL KHGFLSVGYD EAQAQAAAEE GVQLALDWRS QFEVPQSSLD
VLTQLGERVP LVAITNGNVD LDKIGLTPYF QCVLKAGPDG LAKPATDMFT KAKRFLDIPA
ENILHVGDHL TTDVHGAKSA GFAACWFNDM NKNVINHSKT RTLPDIEINS LQPLLTLF
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