| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002110 |
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| Symbol | |
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| ID | 8555765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 532231 |
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| End bp | 533484 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646405129 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_003284738 |
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| Protein GI | 262392884 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATTACT TCAACTATCA GGATGATGGC CAGCTTTGGG CCGAAGACGT CCCACTTCAA
GCTCTTGCAG AGCAATATGG CACTCCTCTT TACGTATATT CTCGAGCCAC GCTAGAGCGC
CACTGGAAGG CGTTTGATAG TGCTGTGGGT CAACATCCTC ATCTAGTTTG CTACGCGGTG
AAAGCGAACT CAAACCTAGG CGTATTGAAC GCACTGGCGC GTTTGGGTTC GGGCTTTGAT
ATCGTATCAG GTGGTGAACT TGAGCGTGTG ATTGCCGCAG GCGGTGATCC GAAGAAAGTC
GTCTTCTCTG GTGTTGGGAA AACACCTGCA GAAATGAAGC GCGCTCTTGA GCTAGGTATC
AAATGTTTCA ACGTTGAATC TGAGCCAGAG CTAGAACGTT TGAACAAGGT TGCGGGTGAG
CTTGGTGTGA TTGCGCCAAT TTCTCTGCGT ATCAATCCAG ATGTCGACGC GAAAACACAC
CCTTACATTT CGACTGGTCT TCGCGACAAT AAATTCGGCA TTGCATTTGA TCGTGCGCCA
GATGTTTATA AATTCGCGCA AAGCCTGCCG AACTTGAATG TGCAAGGCAT CGACTGCCAC
ATTGGTTCTC AGCTGACCAA TATCGACCCA TTTATCGACG CGACAGACCG TTTATTAGCT
CTGATTGATG ATTTAAAAGC GCAAGGCATT AACATTCGTC ACCTTGATGT CGGCGGTGGT
TTGGGTGTGG TCTATCGTGA TGAGTTACCA CCACAGCCTT CAGATTACGC CAAAGCGTTA
CTAGGTCGTC TTGAAAATCA CCAAGACTTG GAGCTGATTT TTGAGCCGGG CCGAGCAATT
GCTGCGAATG CAGGTATCTT GCTAACGCGT GTTGAGTTTT TAAAACATAC TGAGCACAAG
AACTTTGCCA TCATCGATGC GGCAATGAAC GACTTGATGC GTCCTGCACT ATACCAAGCA
TGGCAAGATA TCGTGCCAGT TTCGCCGCGC ACGGGTGAAG CTCAGACTTA CGATTTGGTT
GGCCCTATTT GTGAAACCGG CGACTTCTTG GGTAAAGATC GCGCACTCGT TTTGCAAGAA
GGTGATCTAC TCGCGGTTCG TTCAGCAGGT GCCTATGGTT TTGTTATGTC TTCGAACTAC
AATACTCGTA CCCGAGCGGC AGAAGTAATG GTGGATGGTA AACAAAGCCA CTTAGTTCGC
CAGCGTGAGG AGCTGACCAG TTTGTGGCAG CTGGAACAGA TTCTACCGGA GTAA
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| Protein sequence | MDYFNYQDDG QLWAEDVPLQ ALAEQYGTPL YVYSRATLER HWKAFDSAVG QHPHLVCYAV
KANSNLGVLN ALARLGSGFD IVSGGELERV IAAGGDPKKV VFSGVGKTPA EMKRALELGI
KCFNVESEPE LERLNKVAGE LGVIAPISLR INPDVDAKTH PYISTGLRDN KFGIAFDRAP
DVYKFAQSLP NLNVQGIDCH IGSQLTNIDP FIDATDRLLA LIDDLKAQGI NIRHLDVGGG
LGVVYRDELP PQPSDYAKAL LGRLENHQDL ELIFEPGRAI AANAGILLTR VEFLKHTEHK
NFAIIDAAMN DLMRPALYQA WQDIVPVSPR TGEAQTYDLV GPICETGDFL GKDRALVLQE
GDLLAVRSAG AYGFVMSSNY NTRTRAAEVM VDGKQSHLVR QREELTSLWQ LEQILPE
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