| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002106 |
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| Symbol | |
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| ID | 8555761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 527781 |
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| End bp | 528719 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 646405125 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_003284734 |
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| Protein GI | 262392880 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.632133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAAT CCACACCTAT TCGCATTGCA ACTCGAAAAA GCCCTCTTGC TTTATGGCAA
GCTTACTTTG TCAAAGACGC CCTTCAAGCA GCTCACCCTG GTTTGGAAGT CGAGTTAGTA
ACTATGGTGA CCAAAGGTGA CGTGATTTTA GATACACCGC TAGCAAAAGT TGGCGGCAAA
GGCTTATTCG TAAAAGAGCT TGAAGTCGCA ATGCTAGAAG GCCGTGCAGA CCTTGCCGTT
CACTCAATGA AGGACGTGCC CGTCGATTTC CCGGAAGGTC TTGGCCTCGT GACCATTTGT
GAACGTGAAG ACCCTCGTGA TGCTTTCGTT TCCAATACCT ATAGCAACAT TGATGAACTC
CCTCAAGGTG CAGTGGTTGG TACTTGCAGT TTGCGCCGTC AATGCCAACT GAAAGAATAT
CGTCCAGATA TCATCATTAA AGAGCTTCGC GGTAATGTGG GCACTCGCCT TGGTAAACTA
GATGCGGGTG AATACGATGC GATCATTCTT GCTGCGGCAG GCCTTAAACG ATTGAAGCTT
GAAGAGCGTA TTCGTAGCTT TATCGAGCCA GAGCAATCAT TACCTGCGGT TGGCCAAGGG
GCCGTCGGTA TCGAGTGCCG CCTTGACGAT GAAAGACTGC TTAAGCTACT AGAGCCACTT
AACCACCAAG ACACCGTAGA CCGCGTTTTG TGTGAGCGCG CAATGAACCT GACGCTAGAA
GGCGGCTGTC AGGTACCTAT CGGCAGCTAT GCCCTGCTAG ACGGCGACAA CATTTGGCTA
CGCGCATTAG TTGGCGAACC AGATGGCAGC GAAATTGTTC GTGGTGAAAT TCGTGGCCAT
CGTAAAGATG GCGAAGCATT AGGAGTGCAG CTAGCCAATG AGCTGCTAGA TAACGGCGCT
CGTGAAATCC TAACTAAGCT GTACGCAGAT CACGAATAA
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| Protein sequence | MTQSTPIRIA TRKSPLALWQ AYFVKDALQA AHPGLEVELV TMVTKGDVIL DTPLAKVGGK
GLFVKELEVA MLEGRADLAV HSMKDVPVDF PEGLGLVTIC EREDPRDAFV SNTYSNIDEL
PQGAVVGTCS LRRQCQLKEY RPDIIIKELR GNVGTRLGKL DAGEYDAIIL AAAGLKRLKL
EERIRSFIEP EQSLPAVGQG AVGIECRLDD ERLLKLLEPL NHQDTVDRVL CERAMNLTLE
GGCQVPIGSY ALLDGDNIWL RALVGEPDGS EIVRGEIRGH RKDGEALGVQ LANELLDNGA
REILTKLYAD HE
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