| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002100 |
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| Symbol | |
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| ID | 8555749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 515235 |
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| End bp | 517088 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646405113 |
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| Product | 3-polyprenyl-4-hydroxybenzoate carboxy-lyase |
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| Protein accession | YP_003284728 |
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| Protein GI | 262392874 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00373148 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTA AGGATTTACG CGAATTTATC GACCACCTAG AACAGAAAGG TCGACTTAAA
CGCATTGCTC ACCCTGTCGA TCCCGCTTAC GAAATGACAG AAATCAGTGA CCGCACCTTG
CGTGCTGGTG GCCCTGCTTT GTTATTCGAG AATCCGATCG GCTACAACGT CCCCGTTCTG
ACCAACCTAT TTGGTACACC AGAGCGTGTC GCGATTGGTA TGGGACGTGA AGACGTTAAA
GAATTAAGAG AAGTCGGTAA GCTGCTGGCT TATTTGAAAG AACCTGAGCC ACCAAAAGGC
TTCAAAGACG CATTGGAAAA ATTGCCAGTG TTCAAGCAAG TATTGAACAT GCCAGCCAAG
CGCTTAAGAA AAGCATCGTG CCAAGAGATT GTGTGGCAAG GTGATGAAGT CGACTTGGAC
AAAATCCCGG TAATGAGTTG CTGGGCGGAA GACGTTGCAC CACTGCTTAC GTGGGGCTTA
ACCGTGACCA AAGGTCCAAA CAAGAAACGT CAGAACCTAG GCATTTATCG TCAGCAGAAA
ATTGCCAAGA ACAAAATCAT CATGCGTTGG TTAGCTCACC GTGGTGGTGC GCTTGACCTA
CGTGATTGGA TGGAAACCAA TCCAGGTAAA CCTTTTCCGG TTTCGGTTGC GTTTGGCGCA
GACCCTGCAA CCATTCTTGG CGCAGTAACA CCAGTGCCAG ATACGCTATC GGAGTACGCG
TTTGCAGGTT TGCTGCGTGG AAGCAAAACT GAAGTCGTTA AGTCAGTCAG CAATGATCTG
GAAGTGCCAG CAAGCGCGGA AATCGTCATG GAAGGCTATA TCGACCCGAA CGAGTTTGCT
GATGAAGGTC CTTATGGTGA TCACACGGGC TACTACAACG AAAAAGAAAA GCATCACGTG
TTTACCATTA CGCACATTAC TATGCGTAAA GACCCAATCT ATCACAGTAC CTACACAGGT
CGTCCGCCAG ATGAACCTGC TGTATTGGGG GTGGCATTAA ACGAAGTGTT TGTGCCGATT
CTGCAAAAGC AGTTCCCAGA AATTGAAGAC TTCTATCTAC CGCCTGAAGG TTGTTCGTAC
CGAATGGCAG TCGTCACCAT GAAGAAGCAG TACCCAGGTC ATGCCAAGCG CGTAATGATG
GGGGTGTGGT CTTTCTTACG TCAATTCATG TACACCAAGT TTGTTATTGT GTGCGATGAA
TCGGTAAACG CGCGAGATTG GAATGATGTC GTTAAAGCCA TGTCAGAGCA TATGGATCCT
GTACGTGATA CCTTGATGAT AGACAACACG CCAATCGACT CGCTCGACTT TGCTTCGCCA
GTGGTTGGGC TTGGCTCTAA GATGGGCTTG GATGCGACCA TTAAATGGGA TGCCGAGCTG
GCGACACGAA CCAAGGTTAC CGAGCGTGAC AATAAAGCGA TTACCGAAGC GGATCTGGAT
GCATTAAAAC AGCAATGTCC TGAGATTGTT GACGTCTATC TACCAGCTGC AGCAAACAAC
CAATTTGCTG TCGTGACTAT GAAGAAAGAC CAAGCTGGTC AATCTCAAGA ATTGATGGAA
TATTTATGGG GATTCTTTTC TCAGTACGCG GATAACAAAT TCATTATCTT GTGCGACGAT
GACGTCAATG CACGAGATTG GAATGACATC ATTTGGGCTG TAACAACTCG AATGGACCCA
GATAGAGACA CAACTCAAGT GCGTGGTAAT ACTGAGAGTT CATCCAAATT AGGATTGGAT
GCGACCAACA AGTTCGAATC TGAAGTCACG CGCGAGTGGG GTACGCCTAT CAAAAAAGAT
CCTAAACTTG TGGCTAAAGT CGATGAGATT TGGGACCAGT TAGGTATTCT ATGA
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| Protein sequence | MSFKDLREFI DHLEQKGRLK RIAHPVDPAY EMTEISDRTL RAGGPALLFE NPIGYNVPVL
TNLFGTPERV AIGMGREDVK ELREVGKLLA YLKEPEPPKG FKDALEKLPV FKQVLNMPAK
RLRKASCQEI VWQGDEVDLD KIPVMSCWAE DVAPLLTWGL TVTKGPNKKR QNLGIYRQQK
IAKNKIIMRW LAHRGGALDL RDWMETNPGK PFPVSVAFGA DPATILGAVT PVPDTLSEYA
FAGLLRGSKT EVVKSVSNDL EVPASAEIVM EGYIDPNEFA DEGPYGDHTG YYNEKEKHHV
FTITHITMRK DPIYHSTYTG RPPDEPAVLG VALNEVFVPI LQKQFPEIED FYLPPEGCSY
RMAVVTMKKQ YPGHAKRVMM GVWSFLRQFM YTKFVIVCDE SVNARDWNDV VKAMSEHMDP
VRDTLMIDNT PIDSLDFASP VVGLGSKMGL DATIKWDAEL ATRTKVTERD NKAITEADLD
ALKQQCPEIV DVYLPAAANN QFAVVTMKKD QAGQSQELME YLWGFFSQYA DNKFIILCDD
DVNARDWNDI IWAVTTRMDP DRDTTQVRGN TESSSKLGLD ATNKFESEVT REWGTPIKKD
PKLVAKVDEI WDQLGIL
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