| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002096 |
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| Symbol | |
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| ID | 8555745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 510832 |
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| End bp | 512151 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646405109 |
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| Product | ATP-dependent RNA helicase RhlB |
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| Protein accession | YP_003284724 |
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| Protein GI | 262392870 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00895445 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA CGCATATCAC AGAGCAAAAG TTCGCCGATT TGGGCTTAAA GCCCCAAGTT
ATTGAAGGAT TGGACAAAAA AGGGTTCGAA TTTTGTACCC CTATCCAAGC CTTGGCGTTG
CCGGTCCTGC TCACCGGCCA AGACATCGCA GGCCAGGCCC AAACGGGTAC TGGTAAAACG
CTCGCGTTTC TTACTGCTAC ATTCAACCAC CTTCTGACGA CACCAGAGCA TGAAGGTCGT
AAGCCTACGC AGCCACGCGC AATCATTATG GCACCAACAC GTGAGCTTGC TATTCAGATT
TACAATGATG CAGAAGCATT AACTGAGAGC ACTGGTCTAA AAACCGCTTT GGCTTACGGT
GGTGAAAGCT ACGATAAGCA ATTGAATAAG CTGCAAGATG GTGTCGATAT TCTGATTGGT
ACGACAGGCC GTATCATCGA TTTCTACAAA CAGCGCGTAT TCAACCTTAA CAACATTCAA
GCCGTTGTTC TGGATGAAGC CGACCGCATG TTCGATCTTG GCTTTATTAA AGACATTCGC
TTCTTGTTCC GTCGTATGCC TGAGCCAAAA GAGCGTTTGA ACATGCTGTT CTCAGCGACG
CTTTCTTACC GTGTTCAAGA ACTGGCATTT GAGCACATGA ACACCCCTGA GCATGTTGTG
GTAGAACCAG AACAGAAAAC TGGTCACCGT ATTCAGGAAG AACTTTTCTA CCCTTCTAAC
GAAGATAAAA TGGCCCTCCT TCAAACTTTG ATTGAAGAAG AATGGCCAGA TCGCGCCATC
ATTTTTGCGA ACACGAAACA CAAGTGTGAA TCGGTTTGGG GTCACTTGGC TGCCGATGGA
CACCGTGTCG GTCTTCTTAC TGGTGATGTA CCGCAGAAGA AACGTGAAAA GATTCTTGAG
CAATTCACCA AAGGTGATGT CGACATTCTT GTTGCAACTG ACGTTGCTGC GCGTGGTCTG
CATATTCCTC AAGTGACGCA CGTTTTCAAC TACGACCTTC CTGACGACTG TGAAGATTAC
GTTCACCGTA TTGGCCGTAC CGGTCGTGCT GGTGCAAGCG GCCACTCGAT CAGTTTTGCT
TGTGAAGAGT ACGCAATTAA CCTGCCTGCA ATCGAAGAAT ACATTGAGCA CACTATCCCA
GTTTCAGAAT ACGATTCGTC AGCGCTGATC CAAGATCTGC CAGCGCCAAT TCGTATGCGT
GCGCCACGCA ACCAACAGCG TCGTACGAAT ACTGGCGGTA CTCGTTCAGG TTCAGGTAAC
CGCAAGCCGC AAGGACGTCG TCCGCGCCAA CCGCGTCAAT CGGCACCAAA ACAATCGTAA
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| Protein sequence | MKKTHITEQK FADLGLKPQV IEGLDKKGFE FCTPIQALAL PVLLTGQDIA GQAQTGTGKT
LAFLTATFNH LLTTPEHEGR KPTQPRAIIM APTRELAIQI YNDAEALTES TGLKTALAYG
GESYDKQLNK LQDGVDILIG TTGRIIDFYK QRVFNLNNIQ AVVLDEADRM FDLGFIKDIR
FLFRRMPEPK ERLNMLFSAT LSYRVQELAF EHMNTPEHVV VEPEQKTGHR IQEELFYPSN
EDKMALLQTL IEEEWPDRAI IFANTKHKCE SVWGHLAADG HRVGLLTGDV PQKKREKILE
QFTKGDVDIL VATDVAARGL HIPQVTHVFN YDLPDDCEDY VHRIGRTGRA GASGHSISFA
CEEYAINLPA IEEYIEHTIP VSEYDSSALI QDLPAPIRMR APRNQQRRTN TGGTRSGSGN
RKPQGRRPRQ PRQSAPKQS
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