| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002091 |
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| Symbol | |
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| ID | 8555740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 504945 |
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| End bp | 505862 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646405104 |
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| Product | protein rarD |
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| Protein accession | YP_003284719 |
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| Protein GI | 262392865 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACCAG AAGACGAACA ACAACGCGCT CGGCAAGGTA TCTTGCTGGC GATTGGTGCC
TATACCATGT GGGGCATTGC GCCGATGTAT TTTAAATCCA TCGCACAAGT ATCCCCTTTG
GAGATTCTGA GCCACCGGGT GATTTGGTCT TTCTTTTTGC TTGCCGCACT CCTTCACTTT
GGCCGTCACT GGCGCTCGGT TTACTACATC GCGAAAGACA AAACGAAGAT CGCTTACCTG
ATCGCAAGTT CTGTATTAAT TGGCGGAAAC TGGCTGATTT TCATCTGGGC GGTCAATTCC
AATCATATGC TTGACGCGAG CTTAGGCTAT TACATTAACC CATTAATCAA TGTCTTGCTC
GGCATGGTCT TTTTGGGAGA GCGACTTCGT AAGTTGCAAT GGTTTGCTGT CGTATTAGCG
GGCTGTGGTG TACTGGTCCA ATTGATTGTA TTCGGCTCCG TGCCCGTTGT TGCGATGGCG
TTAGCAATGA GTTTCGGCTT CTATGGCCTC TTAAGGAAGA AAGTCAGTGT CGATGCAAAA
ACAGGATTGT TTATCGAAAC ATTACTTCTT CTGCCTGTCG CCGCCGTGTA TCTGCTGTTT
ATTGCAGAAA CCCCAACGTC GAATATGCTC ACTAACCCGT TAGCATTAAA TAGCTTGTTG
ATTGCAGCAG GGGTGATTAC CACACTGCCC CTACTTTGTT TTACGGGTGC GGCAACAAGA
CTCAAATTAT CAACATTGGG CTTTTTCCAG TACATTGGCC CAAGCTTGAT GTTCTTACTT
GCAGTACTGA TGTATGGCGA ACCCTTTACC ATGGATAAAG CGATTACCTT TGCCTTTATT
TGGGGAGCGC TAGTCGTATT TAGCTTTGAT GGACTGCGCA ACAACCGTCG CTCACGCCGA
ATCGTTCAGC CACAGTGA
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| Protein sequence | MTPEDEQQRA RQGILLAIGA YTMWGIAPMY FKSIAQVSPL EILSHRVIWS FFLLAALLHF
GRHWRSVYYI AKDKTKIAYL IASSVLIGGN WLIFIWAVNS NHMLDASLGY YINPLINVLL
GMVFLGERLR KLQWFAVVLA GCGVLVQLIV FGSVPVVAMA LAMSFGFYGL LRKKVSVDAK
TGLFIETLLL LPVAAVYLLF IAETPTSNML TNPLALNSLL IAAGVITTLP LLCFTGAATR
LKLSTLGFFQ YIGPSLMFLL AVLMYGEPFT MDKAITFAFI WGALVVFSFD GLRNNRRSRR
IVQPQ
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