Gene VEA_002089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002089 
Symbol 
ID8555738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp503301 
End bp503972 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content46% 
IMG OID646405102 
Productthreonine efflux protein 
Protein accessionYP_003284717 
Protein GI262392863 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAAT CGACTATCCT TTTAACGCTT GCCAGTATCC ACTTCATTGC CTTAATGAGC 
CCAGGTCCGG ATTTTGCGCT TGTGGTACAA AATGCCACCC GTCATGGCCG TCAAACTGGC
TTATACATTG CGCTTGGCTT ATCAGTCGGT ATTTTGCTGC ATTCTTTATT CAGCCTAACT
GGGGTGAGCT ATTTAGTTCA CCAGCATCCT CTGCTCTACT CCGTCTTACA ATTGCTTGGG
GGCAGCTATC TGTTGTATTT GGGTATCGGT GCACTGCGCG GCGTGATCGC GACGATCAAA
AAACCACTTT CTGATCAGCC AAGCAAAAAC AGTAACCTTG TGATCGGTAA TAAACGTCAG
GCGTTTACCA AGGGGTTCGC AACCAATATT CTCAACCCCA AAGCCTTAGT ATTTTTTGTG
AGTTTAATGT CGAGCCTTGT CCCAGTGGGC ATGTCGGTGA CAGGAAAAGG AATTGCTCTG
GTGATTTTGT TTGGTTTGTC GCTACTCTGG TTTTCTAGCC TTGCATGGAT GCTGTCAACG
CAGCGCTTGC AAACAAGATT GCAGCAAGCC GGCATTTATA TAGATGGTTT ATGTGGTGTG
GTATTTACCC TAGTTGGCAG CAGTATTTTA GTGCAAACCT TCCGCTCCTT TCTCGATAAC
TCTCTGATTT AA
 
Protein sequence
MNESTILLTL ASIHFIALMS PGPDFALVVQ NATRHGRQTG LYIALGLSVG ILLHSLFSLT 
GVSYLVHQHP LLYSVLQLLG GSYLLYLGIG ALRGVIATIK KPLSDQPSKN SNLVIGNKRQ
AFTKGFATNI LNPKALVFFV SLMSSLVPVG MSVTGKGIAL VILFGLSLLW FSSLAWMLST
QRLQTRLQQA GIYIDGLCGV VFTLVGSSIL VQTFRSFLDN SLI