| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002080 |
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| Symbol | |
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| ID | 8555729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 494191 |
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| End bp | 495384 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646405093 |
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| Product | putative multidrug resistance protein |
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| Protein accession | YP_003284708 |
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| Protein GI | 262392854 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCTAGCC AGTTTTCTAA TAGTAAAAAA CAGATGGCGT TATTGACCCT TTTGGTTCTT
TTCAGTCCTC TTGCGATTGA TATTTATCTA CCTGCTTTAC CTCTTATTGC TTCCACTTTT
CAGGTCGATA ATGCGCTAGC ACAAGACACG ATCACTTGGT TCTTATTTGC GATGGGTGTC
GGGCAACTGT TTGCTGGCCC TTTGGCAGAT AAACTCGGAC GTCGAACTGT TGCATTGGGC
GGTATCACTA TCTATGCGAT GAGCGCTTTA TTGGCGTGGA GTGCTCAAAA TATTGAATGG
ATGTTGGTTT CCCGACTGCT ACAAGGCTTA GGTGCTTGTG CGACATCGGT AGCAGCCTTT
GCAACAGTTC GCGATATCTT TGGCCCGGAA AAAAGCGGCA AAATGATCAG CTATCTTAAC
GGCGCGATTT GTTTTATTCC GGCATTAGCT CCAATTCTAG GTAGCTGGTT AACTCAGCAA
TTTGATTGGC GAGCTAACTT CAGCTTTATG GCTGGCTTTG CCGTTGTGTC CGGTTCATTG
ATGTTTTTCA TGATGAAAGA GACCAACCCA TCAACGGAAA AGCAAGCCGT GTTTAAGCTC
AGCCGTTATT GGGCAGTGCT TAGTACGCCA TCTTTTGTCT TCCATGCTTC ACTGTGTTTA
ATGGCAATGG CGGTTATTCT CGCGTATGTC ACCTCGGCGC CATCGATATT GATGACAGGG
ATGGGGTTGT CGATGAATGA GTTCACCTTC TGGTTTGGTG TAAATGCAGT GATCAATATT
GCGGCTTGTA TGCTTGCACC TAAGTTTATG GAGCGCGTTG GCACGCACAA CACCTTAGTT
ACGGGGATCT CGACTCTGGG CCTCGCAGGT GTGATCATGC TAGTGATGAA TGGTCAGAAT
ACCGCGCTTT CTTTTATGCT ACCTATTTTC ATGTCGTCAG TGGGTTTTGC ATTCATTCTG
GGTGCAGCAG CAGGAAAAGC ATTGGAACCG TTTGGTGACA AAGCGGGTAC GGCTGCGGCA
CTGCTTGGGT TGTTCCAAAT GAGTGGCTCT GGTTTGTTGG TTGGTACGTT GCAGCGTTTA
TCTTTGGAAC CTCAAACACT GATCGCAATT CATATGTGGG TGCTGTTGCC TGCGTTGGTG
GTTCTGTTTA CAAAAGCAGG TAAGAACTGG CATTCAAGCT TTGCGAAAGC GTAA
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| Protein sequence | MPSQFSNSKK QMALLTLLVL FSPLAIDIYL PALPLIASTF QVDNALAQDT ITWFLFAMGV
GQLFAGPLAD KLGRRTVALG GITIYAMSAL LAWSAQNIEW MLVSRLLQGL GACATSVAAF
ATVRDIFGPE KSGKMISYLN GAICFIPALA PILGSWLTQQ FDWRANFSFM AGFAVVSGSL
MFFMMKETNP STEKQAVFKL SRYWAVLSTP SFVFHASLCL MAMAVILAYV TSAPSILMTG
MGLSMNEFTF WFGVNAVINI AACMLAPKFM ERVGTHNTLV TGISTLGLAG VIMLVMNGQN
TALSFMLPIF MSSVGFAFIL GAAAGKALEP FGDKAGTAAA LLGLFQMSGS GLLVGTLQRL
SLEPQTLIAI HMWVLLPALV VLFTKAGKNW HSSFAKA
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