| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002077 |
|---|
| Symbol | |
|---|
| ID | 8555726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 489903 |
|---|
| End bp | 491015 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 646405090 |
|---|
| Product | thiazole biosynthesis protein ThiH |
|---|
| Protein accession | YP_003284705 |
|---|
| Protein GI | 262392851 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
|---|
| TIGRFAM ID | [TIGR02351] thiazole biosynthesis protein ThiH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTTG TTGAGCAATT TAAGCAGCTT AATTGGGATG ACATTTCGAT GTCGATCTAT
GCGAAAACAG CACAAGATGT CGAGCGAGCA TTGAATAAAC CCAAGCGTGA TTTGGAAGAC
TTTAAAGCGC TAATTTCACC CGCGGCTGAA GCATACTTAG AGCAAATGGC GCAGTTGTCA
TACTCGGCAA CTCGCAAGCG GTTTGGCAAT ACCATGTCGC TTTACATTCC ACTGTACCTT
TCTAACTTGT GCGCCAATGC TTGTACTTAT TGTGGCTTCT CGATGGAGAA CAGAATCAAG
CGTCGTACCT TGAATAGGGA CGAAGTGGCT GCAGAAGTTG AAGCCATTAA ACGCATGAAG
TTCGATAGCG TATTGCTGGT GACTGGCGAA CACGAAACCA AAGTGGGCAT GAAATACTTC
CGCGAAATGG TGCCTATGAT TAAGCAACGC TTTAATTATT TGGCGATGGA AGTGCAGCCG
CTAGATCAAG ACGAATACGC AGAGCTCAAG ACATTGGGTT TGGATGCGGT TATGGTTTAT
CAAGAAACGT ATCATCCTTC GACTTATGCT GAGCACCATT TACGTGGCAA TAAGATGGAT
TTCGAATACC GATTGGATAC ACCCGATCGT CTTGCAAAAG CGGGCATCGA TAAGATCGGT
ATTGGCGCTT TGATAGGATT GGAAGAGTGG CGTACAGATT GTTTTTATGT GGCAGCGCAC
TTGGACTATC TTGAGCGCAC GTATTGGCAG ACTCGTTACT CAATTTCTTT CCCGCGTTTG
CGTCCTTGTG AGGGCGCGCT CCAACCAAAA TCAGTCATGA CGGATAAGCA ACTTGTTCAG
TTGATTTGCG CTTATCGTTT GTTGAATCCA GAAGTGGAGT TGTCGTTATC GACGCGTGAG
TCACCGAAGT TTAGAGACAA CGCATTGCCG TTAGGCATCA CCAGTATGTC TGCTGCATCG
AAAACTCAGC CGGGTGGTTA TGCGATGGAT GATGTTGAAC TCGAGCAGTT TGAGATCAGT
GATGAGCGAA GTGCTGGTTC TGTGGAAGAT ATGATTCGAG CCAAAGGCTT TGACCCAGTA
TGGCGAGACT GGCACTCGGC GTATTCTGGT TAA
|
|---|
| Protein sequence | MSFVEQFKQL NWDDISMSIY AKTAQDVERA LNKPKRDLED FKALISPAAE AYLEQMAQLS
YSATRKRFGN TMSLYIPLYL SNLCANACTY CGFSMENRIK RRTLNRDEVA AEVEAIKRMK
FDSVLLVTGE HETKVGMKYF REMVPMIKQR FNYLAMEVQP LDQDEYAELK TLGLDAVMVY
QETYHPSTYA EHHLRGNKMD FEYRLDTPDR LAKAGIDKIG IGALIGLEEW RTDCFYVAAH
LDYLERTYWQ TRYSISFPRL RPCEGALQPK SVMTDKQLVQ LICAYRLLNP EVELSLSTRE
SPKFRDNALP LGITSMSAAS KTQPGGYAMD DVELEQFEIS DERSAGSVED MIRAKGFDPV
WRDWHSAYSG
|
|---|
| |