Gene VEA_002064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002064 
Symbol 
ID8555704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp472156 
End bp472641 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content51% 
IMG OID646405068 
Productphosphoribosylaminoimidazole carboxylase catalytic subunit 
Protein accessionYP_003284692 
Protein GI262392838 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTCG GTATCATCAT GGGTTCTAAA TCCGATTGGC CAACCATGAA ACTAGCAGCA 
GACATGCTGG ATCAATTTGG CGTGTCTTAC GAAACAAAGG TGGTGTCAGC TCACCGTACT 
CCTCAACTAT TAGCCGATTA CGCTAGCAGC GCGAAAGAAC GCGGCATCAA AGTGATCATC 
GCAGGTGCCG GTGGTGCAGC TCACCTACCG GGAATGGCGG CAGCCTTCAC CAGTTTGCCT 
GTACTTGGCG TTCCGGTTCA ATCTCGCGCA CTAAAAGGCA TGGACTCTCT GCTATCTATT 
GTACAAATGC CAAAAGGCAT TGCCGTCGGT ACGTTAGCGA TTGGCGAAGC GGGCGCTGCA 
AACGCAGGCA TCTTAGCGGC ACAAATCCTA GGCACTCATG ACGAAAGCAT CATGGCGAAG 
GTAGAAGCGT TCCGCAATGA ACAGACGGAA ACCGTACTGG CTAACCCAAA TCCAGCTGAG 
GATTAA
 
Protein sequence
MKVGIIMGSK SDWPTMKLAA DMLDQFGVSY ETKVVSAHRT PQLLADYASS AKERGIKVII 
AGAGGAAHLP GMAAAFTSLP VLGVPVQSRA LKGMDSLLSI VQMPKGIAVG TLAIGEAGAA 
NAGILAAQIL GTHDESIMAK VEAFRNEQTE TVLANPNPAE D