Gene VEA_002062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002062 
Symbol 
ID8555702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand+ 
Start bp470385 
End bp470954 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content46% 
IMG OID646405066 
ProductZn-finger domain-containing protein 
Protein accessionYP_003284690 
Protein GI262392836 
COG category[L] Replication, recombination and repair 
COG ID[COG0551] Zn-finger domain associated with topoisomerase type I 
TIGRFAM ID[TIGR01206] lysine biosynthesis protein LysW 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGTA AAATCGACAA CACCCTTTTC TCTGCCCATG AACACGCATT GGAACACGAG 
CCGTGTCCTA AATGTGGCAG TGAGTTGATC CTCAAACATG GCAAACACGG TCCCTTTCTT 
GGCTGTAGCA ACTACCCAAG CTGTGATTAC ATCAAAGCCC TGCATAACAA TGATGGCCAC 
ATTGTCAAAG AGCTTGGCGT TCCTTGTCCA GATTGTGGTA ACGAGTTGGT ATTACGCCAA 
GGGCGTTATG GTATGTTTGT TGGTTGCAGT AACTATCCGG CTTGTCATCA TATTGAGTCG 
ATTAATCAAC CTGAGCCAGA AAAGCAGCCG CAAGAGCAAC ACGCGTGTCC TGAATGTGGT 
AAAGGTCATT TAGTTGAGCG TAAGACGCGC TTTGGTAAAG CTTTCTACGC ATGTGATAAC 
TACCCTAAAT GCAAATTTGC AGTGAATCTC CCTCCGGTTA AAGGGAGATG CGAAGAATGT 
GGTTTTACTT TGTTGGTGGA GAAGAAACTC GCCAGTGGTG TGAAATTGCA ATGTGCCAAT 
CGTAAGTGCC AGCACACCCA ACAAGGGTAA
 
Protein sequence
MSSKIDNTLF SAHEHALEHE PCPKCGSELI LKHGKHGPFL GCSNYPSCDY IKALHNNDGH 
IVKELGVPCP DCGNELVLRQ GRYGMFVGCS NYPACHHIES INQPEPEKQP QEQHACPECG 
KGHLVERKTR FGKAFYACDN YPKCKFAVNL PPVKGRCEEC GFTLLVEKKL ASGVKLQCAN 
RKCQHTQQG