| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002058 |
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| Symbol | |
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| ID | 8555698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 467637 |
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| End bp | 468731 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646405062 |
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| Product | LysM domain-containing protein |
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| Protein accession | YP_003284686 |
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| Protein GI | 262392832 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.778363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCGAA TTTTCCGCAA CGTTGCCAGT GTTACGTTGC AGTTACTTTT CTCTTTCAAC
GCTGTAGCAA ATGTGGATGC AAACCCACTG ACTGTTAAAG ATGATGCGCC ACAAACATAT
GTAGTCGTGA AGGGCGATAC GCTATGGGAT ATTTCGGCCA TGTACTTGGA TAGCCCGTGG
TTGTGGCCTC GTTTATGGCA AGTAAACCCG GAAATCGACA ACCCTCATTT AATTTATCCC
GGTGACAAGC TGTCTTTGGT GTGGATTAAC GGTCAGCCCG TATTGAGCCT AAAACCGGTA
AAGAAGCTGA GCCCGAAAGC ACGCATCACA GAAAAGAAAG CGGTGCCAAC CGTTGCTGAA
GGTTTGGTGA TGCCGTACCT CAAATCGGAT CGATTGCTGG ATCAAGATGC GTTGAATAGT
GCAGCAAAAG TGATGGGTAG CAGCAAAGGC AGTAAGTATC TGACAGCAGA AGATGTGCTG
TACATCGATG GCAAGCAGAC CGCGACAGGC TGGGCTATTT ACCGACCAGT AGAAACGTTC
TCGCGTGACG ATGTGTCTAA AGAGATCACC GCGCTGCGTT TGATTGCCAA AGGTGAGCTC
GTTGAAGCTT CGAGCGATTA TTCTGGTTTG AAGATCACGT CTCAATTGCA AGAAATCCTG
CGTAACGATA TCGCGTTGCC AAATCAATCA GTCGAGAACA CTGACTTCAC AACAACGTTC
TACCCTATGC CGTCGCCACA AGGCAGTTCT GCAAAGTTGC TGGGCAATAT CGAAGGTATT
CGCTTTAGTT CAACTAACCA AGTCGTGGTG ATTGATAAAG GCACGTCAGA CAATCTGAAA
CAAGGCAGTG TGTTTGATTT AAAAGAAGAC GCGCACCCAG TTTACAAAGA CGGCGATGAG
TTCAAGAAAG AGTTTGGCGT GCTTGATAAG AAAATTACTC TGCCACAGAG TAAAGTTGGC
GAATTGCTTG TGATTCGTCC GTATCAGTAC TTTAGCTTGG CACTGATCAC TAACAGTACG
AAACCCATTA ACCAAGATGT TTCGGTGGTG TCACCGTTGG CGAACGAATT AACCATCGAT
GAATCGACGA AATAA
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| Protein sequence | MNRIFRNVAS VTLQLLFSFN AVANVDANPL TVKDDAPQTY VVVKGDTLWD ISAMYLDSPW
LWPRLWQVNP EIDNPHLIYP GDKLSLVWIN GQPVLSLKPV KKLSPKARIT EKKAVPTVAE
GLVMPYLKSD RLLDQDALNS AAKVMGSSKG SKYLTAEDVL YIDGKQTATG WAIYRPVETF
SRDDVSKEIT ALRLIAKGEL VEASSDYSGL KITSQLQEIL RNDIALPNQS VENTDFTTTF
YPMPSPQGSS AKLLGNIEGI RFSSTNQVVV IDKGTSDNLK QGSVFDLKED AHPVYKDGDE
FKKEFGVLDK KITLPQSKVG ELLVIRPYQY FSLALITNST KPINQDVSVV SPLANELTID
ESTK
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