| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002055 |
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| Symbol | |
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| ID | 8555695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 464635 |
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| End bp | 465918 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 646405059 |
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| Product | ribosomal RNA small subunit methyltransferase B |
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| Protein accession | YP_003284683 |
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| Protein GI | 262392829 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.881444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGTTC GCGCTGCGGC TGCTAACGTC CTGTATCTTG TCGTCGACAA GGGCCACTCA
CTTTCAAGCG CTCTTCCAGC GGCTCAACAA ACGGTACGAC CTCGTGACCA CGCTCTGCTA
CAAGAGATCT GTTACGGTGC GCTACGTTAC CTACCTCGCC TAGAAATGAT TGCAAACCAG
TTGATGGATA AGCCGCTAAA AGGCAAACAA CGCGTTTTCC ATCACCTTAT TTTGGTAGGC
ATTTATCAAC TAAGCTTCAT GCGTATTCCT GCGCATGCTG CAGTCGGTGA AACGGTTGAA
GGTACCAAAG AGCTGAAAGG TCCTCGTCTA CGCGGTCTTA TTAACGCTGT ATTGCGTAAC
TACCAGCGCA ACCAAGAAGA ACTCGACCAA ATGGCGGTCA GCAACAACGC TGGTAAGTAC
GGTCACCCAA GCTGGTTACT AAAACTGCTG CAAGAGGCCT ACCCACAGCA ATGGGAAAGC
ATTGTTGAAG CGAACAACCA AAAAGCACCA ATGTGGCTGC GTGTGAACCA CCAACATCAC
ACTCGTGATG AATACCTTGC GCTACTCAAA AATGAAAACA TTGATAGCAC GCCACACACA
GAAGCAATGG ACGCCATAAA ATTGGCCGCA CCATGTGACG TGATGAAGCT ACCTGGTTTT
GATAAAGGTT GGGTTTCGGT CCAAGATGCG GCAGCGCAGC TTTCGATCAA CTACCTAAAA
CCACAAGACG GCGAACTGAT TTTAGATTGC TGTGCTGCGC CAGGTGGCAA GACGGCGCAC
ATTCTAGAGC GCACGTCGGG CAGTGAAGTG GTCGCAATTG ACTGCGACGA CACACGCCTG
AAACGTGTGC ATGAAAACCT GAAGCGTCTC AACCTTCAGG CAAAAGTGGT TTGCGGTGAT
GCGCGTAATC CACAAGAATG GTGGCAAGGC GAGCAATTTG ATCGCATTTT GCTGGATGCC
CCATGTTCTG CGACTGGCGT GATTCGTCGT CACCCAGACA TCAAATGGCT ACGTCGTGCA
GACGACATCG CCGCATTAGC AGAGCTACAA AGTGAAATTT TTGATGCCAT GTGGACGCAA
CTGAAACCCG GCGGCACAAT GGTTTACGCG ACTTGTTCAA TCACACCGCA AGAAAACGTG
GAGCAAGTAA AAGCGTTTTT AGCACGTACC GCGGATGCGC AACTGCTGGA TTCTGATCCC
GACCAGCCTG GTCGTCAAAT TCTACCAGGC GAAGAAGACA TGGATGGTTT CTACTACGCA
GTGCTAAGCA AAACACACGC GTAA
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| Protein sequence | MNVRAAAANV LYLVVDKGHS LSSALPAAQQ TVRPRDHALL QEICYGALRY LPRLEMIANQ
LMDKPLKGKQ RVFHHLILVG IYQLSFMRIP AHAAVGETVE GTKELKGPRL RGLINAVLRN
YQRNQEELDQ MAVSNNAGKY GHPSWLLKLL QEAYPQQWES IVEANNQKAP MWLRVNHQHH
TRDEYLALLK NENIDSTPHT EAMDAIKLAA PCDVMKLPGF DKGWVSVQDA AAQLSINYLK
PQDGELILDC CAAPGGKTAH ILERTSGSEV VAIDCDDTRL KRVHENLKRL NLQAKVVCGD
ARNPQEWWQG EQFDRILLDA PCSATGVIRR HPDIKWLRRA DDIAALAELQ SEIFDAMWTQ
LKPGGTMVYA TCSITPQENV EQVKAFLART ADAQLLDSDP DQPGRQILPG EEDMDGFYYA
VLSKTHA
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