| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002036 |
|---|
| Symbol | |
|---|
| ID | 8555676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 443917 |
|---|
| End bp | 444819 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 646405040 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003284664 |
|---|
| Protein GI | 262392810 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTCTA AAGCGTCTCT GGAAATGCTG GATACGGTTG CCCGTTTAGG CAGTTTCACC
GCTGCGGCTG AGGTGCTGCA TAAAGTCCCT TCAGCCATCA GTTATGGAGT AAGGCAGGTC
GAGCAAGATT TAGATGTGGT GCTGTTTCGA CGCTTACCGA GGAAAGTGGA GTTAACTCCA
GCAGGTGAAC TTTTTATGGC TGAGGCTCGC TCTTTGCTGC GTCAAATGGA AGAGGTGAAA
GCACAAACAC GCCGAGCAGC TCAAGGATGG AAGAGCACGT TAAAGCTGAC CTTAGATAAC
GTGGTGAAGT TAGAGAAGCT CAAACCTTTG GTGGAAGATT TTTATCGCGA GTTTGAATTT
GCTGAATTGC AGATCAATAT GGAAGTATTT AATGGCTCTT GGGAAGCCAT AGCACAAGGT
AGAGCCGACA TTGTCGTTGG CGCGACATCT GCGGTTCCCG TTGGTGGGGA TTTTGAAGTC
AAAGATATGG GCGTATTGGA TTGGGCATTT GTGATGTCTC CCGCTCATCC CTGTGTTCGC
CAACAAGTGC TTACTGAAGA GTTTGTGAGT CAATTTCCGG CGATCTGCCT TGATGATACT
TCAAACGTGC TGCCAAAGCG CCATACTGGC CATTACCCGC AACAACGCCG ATTGTTACTA
CCCAACTGGT ACAGTGCAAT TGAATGTTTG AAAAATGGAG TTGGCGTGGG TTACATGCCA
CGTCATATTG CAACGCCACT GATCAATGAT GGTGTGCTGG TGGAGAAGGT GATGCCAGAT
GATAAGCCGC TCAGTCATTG TTGCTTGGTC TGGCGCAAAG ATGATAATCA TAAATTGATC
CAATGGATGG TGGATTACCT AGGATCGCCT AATCAGCTAT ATCAAGATTG GTTACAGTCA
TAA
|
|---|
| Protein sequence | MFSKASLEML DTVARLGSFT AAAEVLHKVP SAISYGVRQV EQDLDVVLFR RLPRKVELTP
AGELFMAEAR SLLRQMEEVK AQTRRAAQGW KSTLKLTLDN VVKLEKLKPL VEDFYREFEF
AELQINMEVF NGSWEAIAQG RADIVVGATS AVPVGGDFEV KDMGVLDWAF VMSPAHPCVR
QQVLTEEFVS QFPAICLDDT SNVLPKRHTG HYPQQRRLLL PNWYSAIECL KNGVGVGYMP
RHIATPLIND GVLVEKVMPD DKPLSHCCLV WRKDDNHKLI QWMVDYLGSP NQLYQDWLQS
|
|---|
| |