Gene VEA_002027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002027 
Symbol 
ID8555667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp434409 
End bp434942 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content45% 
IMG OID646405031 
ProductATP synthase delta chain 
Protein accessionYP_003284655 
Protein GI262392801 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.002001 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGATT TGACTACTAT CGCACGCCCC TATGCTAAAG CAGCCTTCGA CTTTGCTTTA 
GAGAAAGACC AGTTGGACCA ATGGGGCCAA ATGTTATCTT TTGCTGCTGA AGTGGCCAAA
AACGAACAAA TGAACGAACT TCTAACCGGT TCGGTTTCTG CTGATAAAAT GGCAGAGATT
TTTGTTGCAG TTTGCGGCGA ACAAGTTGAT ACGCACGGTC AAAACCTTTT GAAGGTGATG
GCTGAGAATG GTCGTTTAGC GGCCCTTCCT GATGTTTGCA CAGAGTTTTA CACTCTGAAG
AAAGAGCATG AGAAAGAAAT TGATGTTGAA GTCATTTCAG CAACAGAACT TTCTGATGAG
CAACTTGCAA ACATTGGCAG CAAACTTGAA AAGCGTCTTG AACGCAAAGT GAAGCTGAAT
TGCAGTGTAG ATGAGACCCT ACTTGGTGGG GTTATTATTC GAGCCGGAGA CCTAGTCATC
GATGACTCAG CGCGTGGTCG TTTGAACCGC CTGAGCGATG CATTGCAGTC TTAA
 
Protein sequence
MSDLTTIARP YAKAAFDFAL EKDQLDQWGQ MLSFAAEVAK NEQMNELLTG SVSADKMAEI 
FVAVCGEQVD THGQNLLKVM AENGRLAALP DVCTEFYTLK KEHEKEIDVE VISATELSDE
QLANIGSKLE KRLERKVKLN CSVDETLLGG VIIRAGDLVI DDSARGRLNR LSDALQS