Gene VEA_002019 details

Gene Information

• Locus tag: VEA_002019
• ID: 8555659
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: +
• Start bp: 427917
• End bp: 429812
• Gene Length: 1896 bp
• Protein Length: 631 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 646405023
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_003284647
• Protein GI: 262392793
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.01188
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTTATC ACGAAAACTT TGACGTCATT GTTGTCGGTG GCGGACACGC AGGAACGGAA 
GCCGCGCTCG CATCTGCACG CACAGGACAA AAAACGCTTC TCCTTACCCA TAACATCGAT 
ACATTAGGCC AGATGTCTTG TAACCCGGCG ATTGGTGGTA TTGGTAAAGG TCACCTAGTA 
AAAGAAGTGG ATGCTATGGG CGGTTTGATG GCTGAAGCCA TCGACCATGC AGGTATTCAA 
TTCCGTACAC TAAATGCCTC CAAAGGTCCT GCAGTTCGGG CGACTCGAGC TCAAGCGGAT 
CGTGCTCTGT ACAAAGCGTA CGTCCGTAAC GCATTAGAAA ATGCACCTAA CTTAACGCTG 
TTCCAGCAGT CAGTGGATGA TCTGATTGTT GAGCAAGACC GCGCGGTTGG CGTGGTGACT 
CAAATGGGAC TTCGCTTCCA TGCGAAAGCC GTCGTACTAA CGGTAGGTAC GTTCCTTGGT 
GGTAAGATCC ACATTGGCAT GGAGAGCTCT TCAGGCGGAC GTGCAGGGGA TCCACCGTCG 
ATCGCATTAG CGGATCGATT ACGTGAGCTG CCATTCCGTG TGGATCGTTT AAAAACGGGT 
ACCCCACCGC GCATTGATGC TCGCACTGTT GATTTTTCAG TGCTTGAAGC TCAGCACGGT 
GATAACCCTA CCCCTGTATT TTCATTCATG GGTAAACGCG AACAACACCC GCGTCAGATC 
CCATGTTTTA TTACGCACAC CAATGAGCAA ACGCACGACG TGATCCGTAG CAACTTGGAT 
CGCAGTCCGA TGTACGCGGG TGTGATTGAA GGCATTGGTC CGCGTTACTG CCCGTCGATT 
GAAGACAAAG TGATGCGTTT TGCGGATAAA AATAGCCACC AAATCTTCAT TGAGCCAGAA 
GGATTAACGA CGCACGAGCT ATACCCTAAC GGTATCTCGA CTAGCTTGCC ATTTGATGTG 
CAAGTACAAA TCGTTCGCTC AATGAAAGGT TTTGAAAATG CGCATATCGT TCGTCCTGGT 
TATGCGATTG AATACGATTT CTTCGATCCA CGTGATTTGA AGCAAACGTA CGAAACCAAG 
TTTATTCATG GTCTGTTCTT TGCTGGTCAG ATTAATGGTA CGACTGGCTA CGAAGAAGCC 
GCAGCGCAAG GCTTGATGGC CGGTCTAAAC GCAAGCTTGT ACAGCCAAGA CAAAGAAGGC 
TGGAGCCCAC GTCGTGACCA AGCTTACATG GGCGTATTGA TTGATGATTT ATCGACCATG 
GGTACCAAAG AACCGTACCG CATGTTCACT TCTCGTGCGG AATACCGCTT GTTGCTACGT 
GAAGATAACG CCGATTTACG TTTAACGGAA AAAGCACGCG AGTTAGGCTT GATTGACAAT 
GTTCGTTGGG CTCGCTTTAA CGAGAAACTC AATAACATGG AAACGGAACG TCAGCGTTTG 
AAATCAACGT GGATGAATCC GAAATCAGAA GGCGTTGATG AGCTGAACAA GCTGCTGAAA 
ACCCCAATGG CACGTGAAGC GAGTGGTGAG GATCTTCTGC GTCGTCCAGA GATCACTTAT 
TCGCAACTGA CGCAACTTGA AGCGTTTGCT CCTGCACTTG AAGATCAGCA AGCGGCGGAG 
CAAGTTGAAA TTCAAGTAAA ATACGATGGT TACATCAAGC GTCAGCAGGA AGAGATCGAA 
AAATCATTGC GTCACGAAAA TACCAAGCTA CCCGCAGATT TGGATTACCG CGATGTAAAA 
GGTTTATCAA ACGAAGTCGT TGCTAAACTG AGTGAAGCCA AACCAGAGAG CATCGGTATT 
GCATCGCGCA TTTCTGGTAT TACGCCTGCT GCAATTTCTA TTCTACTTGT TCACTTGAAA 
AAGCATGGTT TGCTGAAGAA AGGTGAGGAA GAATAA 

 

Protein sequence

MLYHENFDVI VVGGGHAGTE AALASARTGQ KTLLLTHNID TLGQMSCNPA IGGIGKGHLV 
KEVDAMGGLM AEAIDHAGIQ FRTLNASKGP AVRATRAQAD RALYKAYVRN ALENAPNLTL 
FQQSVDDLIV EQDRAVGVVT QMGLRFHAKA VVLTVGTFLG GKIHIGMESS SGGRAGDPPS 
IALADRLREL PFRVDRLKTG TPPRIDARTV DFSVLEAQHG DNPTPVFSFM GKREQHPRQI 
PCFITHTNEQ THDVIRSNLD RSPMYAGVIE GIGPRYCPSI EDKVMRFADK NSHQIFIEPE 
GLTTHELYPN GISTSLPFDV QVQIVRSMKG FENAHIVRPG YAIEYDFFDP RDLKQTYETK 
FIHGLFFAGQ INGTTGYEEA AAQGLMAGLN ASLYSQDKEG WSPRRDQAYM GVLIDDLSTM 
GTKEPYRMFT SRAEYRLLLR EDNADLRLTE KARELGLIDN VRWARFNEKL NNMETERQRL 
KSTWMNPKSE GVDELNKLLK TPMAREASGE DLLRRPEITY SQLTQLEAFA PALEDQQAAE 
QVEIQVKYDG YIKRQQEEIE KSLRHENTKL PADLDYRDVK GLSNEVVAKL SEAKPESIGI 
ASRISGITPA AISILLVHLK KHGLLKKGEE E