| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002016 |
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| Symbol | |
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| ID | 8555656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 423803 |
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| End bp | 425425 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646405020 |
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| Product | OxaI/YidC membrane insertion protein |
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| Protein accession | YP_003284644 |
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| Protein GI | 262392790 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000829805 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTCTC AACGTAATAT CCTGCTCATC GGTTTGGCCC TGGTTTCTTT TTTGCTGTTT
CAACAATGGC AAGTTGCAAA GAATCCAGAA CCTCAAGCAG TTGAACAGGC TCAATCAAGC
AGCACTCTAC CTGCACCATC TTTTGCTGAT GAACTTGACC CAGTTCCTGG TCAACAGCAA
GCTTCTGCAA AAACTATCAC AGTAACGACT GATGTTTTAA CTCTGTCGAT CGACACCGTT
GGTGGCGATG TGGTACATGC CAACCTTAAC GAATACTCTG CTGAGTTAGA TTCATCAGAT
TCCTTTGTTC TGCTTAAAGA CGATCAAGGT CACCAATTTA TCGCTCAAAG CGGTCTAGTG
GGTCCTCAAG GTATCGACTT GAGCAGCACA AATCGCCCTC ACTACAACGT AAGTGCAGAC
AGCTTCACAA TGGCTGACGG TCAAGATGAA CTTCGCGTTC CGATGACATT CACTACAAAC
GGCATCGAAT ACACCAAAAC TTACATCTTT AAACGCGGCA GCTACGCGCT TAATGTTGAA
TACGATGTAG TGAACAACTC AGGCAACAAC GCAACATTTG GTATGTACGC ACACCTACGT
CAAAACCTAA TGGACGATGG TGGTAGCATC ACAATGCCTA CTTACCGTGG TGGCGCATAC
TCAACAGAAG ATACGCGTTA CAAGAAGTAC AGCTTTGATG ATATGCAGGA TCGCAACCTG
TCTCTAAACC TAGCCGATGG CCAAGGTTGG GCAGCAATGA TTCAGCATTA CTTTGCCGCA
GCTTGGATCC CACGTAACGA ACCAGGTACT AACCTATACA CTCGTGTAAT TGGCAACCTA
GGCGACATCG GCGTTCGTAT GCCGAACAAA ACTATCGCAA CAGGCGATCA GGCTAAGTTT
GAAGCAACAC TTTGGGTTGG TCCAAAACTG CAAGATGAAA TGGCAGAAGT GGCACCTAAC
CTAGACCTAG TAGTGGACTA CGGCTGGTTA TGGTTCATTG CGAAGCCTCT TCATATGTTG
CTTTCATTCA TCCAGAGCTT TGTTGGTAAC TGGGGTGTGG CAATCATCTG TCTGACCTTC
ATCGTTCGTG GTGCAATGTA CCCACTAACA AAAGCGCAAT ACACGTCTAT GGCGAAAATG
CGTATGCTTC AGCCTAAGCT GCAAGCTATG CGTGAGCGCA TCGGTGATGA CCGTCAGCGC
ATGAGCCAAG AAATGATGGA ACTGTACAAG AAAGAGAAAG TGAACCCACT AGGTGGCTGT
TTACCTCTTA TCCTACAGAT GCCTATCTTC ATCGCACTAT ACTGGGCGCT AATGGAATCG
GTAGAGCTTC GTCACTCACC ATTCTTTGGT TGGATTCACG ACTTGTCAGC GCAGGACCCT
TACTACATCC TGCCGCTATT GATGGGTGCG TCTATGTTCC TAATCCAGAA GATGAGCCCG
ACAACGGTAA CGGATCCAAT GCAGCAGAAG ATCATGACCT TTATGCCGGT TATGTTTACC
TTCTTCTTCT TGTTCTTCCC ATCAGGTCTC GTTCTGTACT GGTTGGTGTC GAACATCGTA
ACGCTTATCC AGCAAACTCT GATCTACAAA GGGTTAGAGA AAAAAGGCTT ACACAGCAAG
TAA
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| Protein sequence | MDSQRNILLI GLALVSFLLF QQWQVAKNPE PQAVEQAQSS STLPAPSFAD ELDPVPGQQQ
ASAKTITVTT DVLTLSIDTV GGDVVHANLN EYSAELDSSD SFVLLKDDQG HQFIAQSGLV
GPQGIDLSST NRPHYNVSAD SFTMADGQDE LRVPMTFTTN GIEYTKTYIF KRGSYALNVE
YDVVNNSGNN ATFGMYAHLR QNLMDDGGSI TMPTYRGGAY STEDTRYKKY SFDDMQDRNL
SLNLADGQGW AAMIQHYFAA AWIPRNEPGT NLYTRVIGNL GDIGVRMPNK TIATGDQAKF
EATLWVGPKL QDEMAEVAPN LDLVVDYGWL WFIAKPLHML LSFIQSFVGN WGVAIICLTF
IVRGAMYPLT KAQYTSMAKM RMLQPKLQAM RERIGDDRQR MSQEMMELYK KEKVNPLGGC
LPLILQMPIF IALYWALMES VELRHSPFFG WIHDLSAQDP YYILPLLMGA SMFLIQKMSP
TTVTDPMQQK IMTFMPVMFT FFFLFFPSGL VLYWLVSNIV TLIQQTLIYK GLEKKGLHSK
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