| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002011 |
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| Symbol | |
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| ID | 8555651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 421424 |
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| End bp | 422095 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646405015 |
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| Product | amino acid ABC transporter permease protein |
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| Protein accession | YP_003284639 |
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| Protein GI | 262392785 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000538879 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGATTTG ACTTTAATTA CATGTTGGAA CTGCTGCCGA TATTGCTGAA ATATCTTGGC
ACTACCATGG AAATGGCGAC ATGGGGATTG GTGTTTTCAC TGATTTTATC CGTCATTTTA
GCCAATATTC GCGTATTTAA ACTGCCAGTT CTGGATCAAT TAAGCCAACT GTACATCAGC
TTCTTCCGTG GCACCCCTCT CTTAGTTCAG CTTTTCCTGC TTTATTACGG CTTACCACAA
ATTTTCCCAT TGATGGTGGG TATTGATGCC TTCTCAGCAG CGGTGATCGG TTTAACGCTG
CACTTTGCCG CTTATATGGC GGAAAGTATT CGTGCCGCCA TTATTGGTAT TGATCGTAGC
CAGATGGAAG CGAGCTTGTC GGTGGGCATG ACAACATCTC AGGCGATGCG CCGCGTCATT
TTACCTCAAG CAACGCGTGT CGCACTGCCT TCATTGATGA ACTATTTCAT CGATATGATC
AAGTCAACGT CTCTCGCCTT CACGCTTGGT GTGGCCGAAA TCATGGCGAA AGCACAGATG
GAAGCCTCAT CAAGTTTCCG TTTCTTTGAA GCTTTCCTTG CGGTTGCTCT TATTTACTGG
GGCGTGGTGG TGATTCTGAC TCGCGTACAA ATCTGGGCAG AAGCAAAACT GAATAAGGCG
TACGTACGAT GA
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| Protein sequence | MGFDFNYMLE LLPILLKYLG TTMEMATWGL VFSLILSVIL ANIRVFKLPV LDQLSQLYIS
FFRGTPLLVQ LFLLYYGLPQ IFPLMVGIDA FSAAVIGLTL HFAAYMAESI RAAIIGIDRS
QMEASLSVGM TTSQAMRRVI LPQATRVALP SLMNYFIDMI KSTSLAFTLG VAEIMAKAQM
EASSSFRFFE AFLAVALIYW GVVVILTRVQ IWAEAKLNKA YVR
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