Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002008 |
Symbol | |
ID | 8555648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 417580 |
End bp | 418680 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646405012 |
Product | DNA polymerase III beta subunit |
Protein accession | YP_003284636 |
Protein GI | 262392782 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000997729 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTA CCATTGAACG TAGTCATTTA ATCAAACCGC TACAGCAGGT TTCGGGCGCT TTAGGTGGCC GACCAACTCT GCCAATCCTG GGTAACCTAC TTCTTAAAGT AGAAGAGAAC GTATTGTCGA TGACGGCGAC CGATCTTGAA GTAGAGTTAG TAAGCAAAGT GACGCTAGAA GGTGATTTTG AAGCGGGCAG CATTACCGTT CCTTCGCGTA AGTTTCTCGA TATCTGCCGT GGTTTACCAG ACGATGCGAT CATCACATTT GTATTAGAAG GTGATCGCGT ACAAGTTCGC TCTGGTCGCA GCCGTTTCTC ATTGGCAACG CTTCCTGCGA ACGATTTCCC TAATATTGAA GACTGGCAAA GCGAAGTGGA AGTATCACTG AGCCAAGCCG ATCTACGTAC GCTGATCGAC AAAACTCAGT TCTCGATGGC GAATCAAGAC GTTCGTTACT ACCTCAACGG TATGTTGTTT GAAATTGACG GTACCACGCT ACGCAGCGTG GCGACGGACG GCCACCGTAT GGCGGTATCG CAAACTCAGC TGGGTGCGGA TTTTGCGCAG AAGCAAATCA TCGTGCCACG TAAAGGTGTG CAAGAATTAG TGAAGTTGAT GGACGCGCCA GAGCAACCTG TAGTACTTCA GATCGGTAGC TCCAATGTTC GTGCTGAGGT GAATAACTTT ACTTTTACCT CTAAGTTGGT TGATGGTCGT TTCCCTGACT ACCGCCGCGT ATTGCCTCAG AGCACCAATA AGACCCTAAT AGCAAGTTGT GACGAGTTGC GCCAAGCCTT CTCTCGTGCT GCGATTCTTT CCAACGAAAA ATTCCGTGGC GTGCGTGTGA ATCTGGCTGA TACTGAAATG CGCATAACCG CGAATAACCC AGAACAAGAA GAAGCGGAAG AGATGCTAGA TGTGACCTTT GAAGGTGACG CCATCGAAAT CGGCTTTAAC GTAAGCTATG TGCTTGATGT TCTGAACACG TTGCGTTGTG AAAATGTACG TGTGTCGATG TCGGATGCTA ACGCTAGCGC ATTGATTGAA AATGCCGACG ATGACAGTGC CATGTACGTG GTGATGCCAA TTCGTCTATA A
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Protein sequence | MKFTIERSHL IKPLQQVSGA LGGRPTLPIL GNLLLKVEEN VLSMTATDLE VELVSKVTLE GDFEAGSITV PSRKFLDICR GLPDDAIITF VLEGDRVQVR SGRSRFSLAT LPANDFPNIE DWQSEVEVSL SQADLRTLID KTQFSMANQD VRYYLNGMLF EIDGTTLRSV ATDGHRMAVS QTQLGADFAQ KQIIVPRKGV QELVKLMDAP EQPVVLQIGS SNVRAEVNNF TFTSKLVDGR FPDYRRVLPQ STNKTLIASC DELRQAFSRA AILSNEKFRG VRVNLADTEM RITANNPEQE EAEEMLDVTF EGDAIEIGFN VSYVLDVLNT LRCENVRVSM SDANASALIE NADDDSAMYV VMPIRL
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