Gene VEA_002008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002008 
Symbol 
ID8555648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp417580 
End bp418680 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content48% 
IMG OID646405012 
ProductDNA polymerase III beta subunit 
Protein accessionYP_003284636 
Protein GI262392782 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000997729 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA CCATTGAACG TAGTCATTTA ATCAAACCGC TACAGCAGGT TTCGGGCGCT 
TTAGGTGGCC GACCAACTCT GCCAATCCTG GGTAACCTAC TTCTTAAAGT AGAAGAGAAC
GTATTGTCGA TGACGGCGAC CGATCTTGAA GTAGAGTTAG TAAGCAAAGT GACGCTAGAA
GGTGATTTTG AAGCGGGCAG CATTACCGTT CCTTCGCGTA AGTTTCTCGA TATCTGCCGT
GGTTTACCAG ACGATGCGAT CATCACATTT GTATTAGAAG GTGATCGCGT ACAAGTTCGC
TCTGGTCGCA GCCGTTTCTC ATTGGCAACG CTTCCTGCGA ACGATTTCCC TAATATTGAA
GACTGGCAAA GCGAAGTGGA AGTATCACTG AGCCAAGCCG ATCTACGTAC GCTGATCGAC
AAAACTCAGT TCTCGATGGC GAATCAAGAC GTTCGTTACT ACCTCAACGG TATGTTGTTT
GAAATTGACG GTACCACGCT ACGCAGCGTG GCGACGGACG GCCACCGTAT GGCGGTATCG
CAAACTCAGC TGGGTGCGGA TTTTGCGCAG AAGCAAATCA TCGTGCCACG TAAAGGTGTG
CAAGAATTAG TGAAGTTGAT GGACGCGCCA GAGCAACCTG TAGTACTTCA GATCGGTAGC
TCCAATGTTC GTGCTGAGGT GAATAACTTT ACTTTTACCT CTAAGTTGGT TGATGGTCGT
TTCCCTGACT ACCGCCGCGT ATTGCCTCAG AGCACCAATA AGACCCTAAT AGCAAGTTGT
GACGAGTTGC GCCAAGCCTT CTCTCGTGCT GCGATTCTTT CCAACGAAAA ATTCCGTGGC
GTGCGTGTGA ATCTGGCTGA TACTGAAATG CGCATAACCG CGAATAACCC AGAACAAGAA
GAAGCGGAAG AGATGCTAGA TGTGACCTTT GAAGGTGACG CCATCGAAAT CGGCTTTAAC
GTAAGCTATG TGCTTGATGT TCTGAACACG TTGCGTTGTG AAAATGTACG TGTGTCGATG
TCGGATGCTA ACGCTAGCGC ATTGATTGAA AATGCCGACG ATGACAGTGC CATGTACGTG
GTGATGCCAA TTCGTCTATA A
 
Protein sequence
MKFTIERSHL IKPLQQVSGA LGGRPTLPIL GNLLLKVEEN VLSMTATDLE VELVSKVTLE 
GDFEAGSITV PSRKFLDICR GLPDDAIITF VLEGDRVQVR SGRSRFSLAT LPANDFPNIE
DWQSEVEVSL SQADLRTLID KTQFSMANQD VRYYLNGMLF EIDGTTLRSV ATDGHRMAVS
QTQLGADFAQ KQIIVPRKGV QELVKLMDAP EQPVVLQIGS SNVRAEVNNF TFTSKLVDGR
FPDYRRVLPQ STNKTLIASC DELRQAFSRA AILSNEKFRG VRVNLADTEM RITANNPEQE
EAEEMLDVTF EGDAIEIGFN VSYVLDVLNT LRCENVRVSM SDANASALIE NADDDSAMYV
VMPIRL