| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002006 |
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| Symbol | |
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| ID | 8555646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 414060 |
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| End bp | 416477 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646405010 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_003284634 |
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| Protein GI | 262392780 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.132236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAA ATTACGATTC ATCGAGTATT AAGGTACTGA AGGGTCTGGA TGCGGTACGT
AAGCGTCCAG GAATGTACAT CGGCGATACG GACGACGGCA CCGGCCTTCA CCACATGGTT
TTCGAGGTGG TGGATAACTC AATTGATGAA GCGTTGGCAG GTCACTGTAA AGACATCGTT
GTGACAATTC ATGAGGATAA CTCGGTTTCC GTTAGCGATG ATGGTCGTGG CATTCCAACA
GAAATCCACT CAGAGGAAAA TGTCTCTGCA GCAGAAGTAA TCATGACGGT ACTTCACGCG
GGTGGTAAGT TCGACGATAA CTCATACAAA GTATCGGGTG GTCTTCACGG GGTAGGTGTT
TCAGTGGTAA ACGCTCTATC TGAGAAAGTT GAGCTGACGA TTCATCGTGG TGGCCATATC
CATACGCAAA CCTACCGCCA TGGTGAGCCT CAAGCGCCAC TAGCCGTTGT GGGTGATACG
GATAAAACCG GTACACAAAT TCGTTTCTGG CCAAGTGCCG AGACGTTCTC TAACACTGAG
TTTCACTATG ACATTCTGGC GAAACGCCTG CGTGAACTGT CATTCCTGAA CTCTGGTGTG
TCGATCAAAT TGGTTGATGA ACGTGAAGCG GACAAACATG ATCACTTCAT GTATGAAGGT
GGTATTCAAG CGTTCGTTGA TCACCTAAAC ACCAACAAAA CGCCAATCAT CGAAAAAATC
TTCCACTTTA ACTCTGAGCG TGAAGACGGC ATTTCAGTTG AAGTGGCGAT GCAATGGAAC
GATGGTTTCC AAGAGAATAT CTTCTGTTTT ACCAACAATA TCCCACAGCG TGATGGTGGT
ACTCACCTTG CTGGTTTCCG TGCTGCGTTA ACACGTACAT TGAACAGCTT TATGGATAAA
GAAGGTTTCT CTAAGAAAGC AAAAACAGCG ACTTCAGGCG ACGATGCGCG TGAAGGTCTA
ACTGCGGTTG TTTCGGTGAA AGTGCCTGAT CCTAAGTTCT CAAGCCAAAC AAAAGACAAA
CTGGTTTCTT CTGAAGTGAA ATCAGCTGTT GAGTCTGCAA TGGGTGAAAA ACTGTCTGAG
TTCCTGATTG AGAACCCGAC AGAAGCGAAG ATGGTTTGTT CGAAAATCAT CGATGCAGCA
CGTGCTCGTG AAGCAGCGCG TAAAGCTCGT GAAATGACGC GCCGTAAAGG TGCACTAGAC
CTAGCTGGCC TTCCAGGTAA ACTTGCAGAC TGTCAGGAAA AAGATCCGGC ACTCTCTGAA
CTATACATAG TGGAGGGTGA TTCGGCAGGC GGCTCCGCAA AACAAGGCCG TAATCGTAAG
AACCAAGCAA TCCTACCGCT AAAAGGTAAG ATTCTTAACG TAGAAAAAGC ACGTTTCGAC
AAGATGCTAT CTTCCCAAGA AGTAGCAACA CTGATCACCG CACTAGGTTG TGGTATCGGT
CGTGACGAGT ACAACCCGGA CAAGCTTCGT TACCACAACA TCATCATCAT GACCGATGCC
GATGTCGATG GTTCGCACAT CCGTACGCTA CTATTGACCT TCTTCTACCG TCAAATGCCA
GAGCTTATCG AGCGTGGTTA CGTGTACATC GCTCAGCCAC CACTTTACAA AGTGAAAAAA
GGCAAACAAG AGCAGTACAT CAAAGACGAA GAAGCGATGA ACCAATACCA AGTATCATTG
GCTCTGGATA ATGCATCGCT ACACGTAAAC GCAGAAGCAC CAGCATTGGC AGGTGAAGCA
CTAGAGAAGC TTGTTCAACA GTACAATGCG GGTATTAAAC TGGCGGAACG TATGAGCCGT
CGTTACCCAA GTGCTTTGGT AAACGAGTTG ATCTACACTC CTCGTCTAAC GCCTGAGCAA
TGCCATGACG CATCAGTTGT TGAAGCGTGG ACGAAGCAGC TTATTGAGCA GCTGAATGCG
AAAGAAGTGG GCGCTAGCCA ATACAGCTAC GAAGTTGAAC AGCACGAAGA ACTAGGCTTA
AACTTGCCTA AGATCGTGGT TCGTACTCAC GGCGTGACGC ACGAACATGC AATTAGCATC
GATTTCCTAA ACTCGAAAGA GTACGGCAAA TTGGCTGATC TATCAGAAGC ACTGGATGGG
CTTCTGGAAG AAGGCGCGTA CATCAAACGT GGTGAGCGTA CGATGCCAGT AGCAAGCTTT
GCAGAAGCGC TTGATTGGTT GGTTAAAGAG TCAATGCGTG GTCTGAGCCG TCAGCGTTAC
AAAGGTCTAG GTGAGATGAA CCCAGATCAG CTGTGGGAAA CGACTATGGA CCCAGAAACG
CGTCGCATGA TGCAAGTAAC GATTGAGGAT GCGGTAGGCG CAGACCAATT GTTCACAACA
CTGATGGGTG ACCAAGTAGA ACCTCGTCGT AACTTCATCG AAGAGAACGC ACTGAAAGTA
GCGAACCTAG ACGTATAA
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| Protein sequence | MSENYDSSSI KVLKGLDAVR KRPGMYIGDT DDGTGLHHMV FEVVDNSIDE ALAGHCKDIV
VTIHEDNSVS VSDDGRGIPT EIHSEENVSA AEVIMTVLHA GGKFDDNSYK VSGGLHGVGV
SVVNALSEKV ELTIHRGGHI HTQTYRHGEP QAPLAVVGDT DKTGTQIRFW PSAETFSNTE
FHYDILAKRL RELSFLNSGV SIKLVDEREA DKHDHFMYEG GIQAFVDHLN TNKTPIIEKI
FHFNSEREDG ISVEVAMQWN DGFQENIFCF TNNIPQRDGG THLAGFRAAL TRTLNSFMDK
EGFSKKAKTA TSGDDAREGL TAVVSVKVPD PKFSSQTKDK LVSSEVKSAV ESAMGEKLSE
FLIENPTEAK MVCSKIIDAA RAREAARKAR EMTRRKGALD LAGLPGKLAD CQEKDPALSE
LYIVEGDSAG GSAKQGRNRK NQAILPLKGK ILNVEKARFD KMLSSQEVAT LITALGCGIG
RDEYNPDKLR YHNIIIMTDA DVDGSHIRTL LLTFFYRQMP ELIERGYVYI AQPPLYKVKK
GKQEQYIKDE EAMNQYQVSL ALDNASLHVN AEAPALAGEA LEKLVQQYNA GIKLAERMSR
RYPSALVNEL IYTPRLTPEQ CHDASVVEAW TKQLIEQLNA KEVGASQYSY EVEQHEELGL
NLPKIVVRTH GVTHEHAISI DFLNSKEYGK LADLSEALDG LLEEGAYIKR GERTMPVASF
AEALDWLVKE SMRGLSRQRY KGLGEMNPDQ LWETTMDPET RRMMQVTIED AVGADQLFTT
LMGDQVEPRR NFIEENALKV ANLDV
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