| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002002 |
|---|
| Symbol | |
|---|
| ID | 8555642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 410990 |
|---|
| End bp | 412243 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 646405006 |
|---|
| Product | valine--pyruvate aminotransferase |
|---|
| Protein accession | YP_003284630 |
|---|
| Protein GI | 262392776 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3977] Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTTCT CAAAGTTTGG TGAAAAATTT AATCAGTATT CAGGTATCAC GCAGTTAATG
GACGATTTGA ATGATGGTCT ACGCACACCA GGTGCCATCA TGCTCGGTGG AGGTAACCCA
GCCGCCATTC CTGCCATGCT CGATTATTTT CACCAAGCCA GTGAGGAAAT GCTCGCCAGT
GGAGAGCTCG TCGCCGCCCT AGCCAACTAC GATGGGCCAC AGGGTAAAGA CGCGTTCGTG
AAAGCGCTGG CTCAGTTATT CCGTGAAACT TACGGTTGGG ACATTTCAGA GAAGAACATC
AGCCTAACTA ACGGCAGCCA AAGTGGCTTC TTCTACTTGT TCAACTTACT CGCAGGTAAA
CAGCCAGACG GTTCGCATAA GAAGGTGCTA CTGCCTATCG CGCCTGAGTA CATCGGCTAT
GGTGATGCTG GCATTGATGA AGATATCTTT GTCTCTTACC ACCCAGAAAT CGAGCTGTTA
GATAACGGAT TGTTTAAATA CCATGTCGAT TTTGAACAGC TAACCGTCGA CGATTCTGTT
ACGGCAATCT GCGCATCTCG CCCAACCAAC CCAACGGGTA ACGTACTGAC AGACGAAGAA
GTGCGTAAAC TGGACAAACT CGCACGTGAA AACAACATCC CACTGATCAT CGATAACGCC
TACGGCTTGC CGTTCCCGAA CATCATCTTT GAAGATGTCG AACCATTCTG GAATGAAAAC
ACCATCCTAT GCATGAGCTT ATCTAAACTT GGCTTACCGG GTGTGCGTTG TGGCATTGTG
ATTGCGAGTG AAGAAATCAC TCAAGCGTTA ACCAATATGA ACGGCATCAT CAGCCTAGCA
CCAGGCAGTG TGGGGCCAGC GCTGGCAAAC CACATCATCG CTAAAGGCGA CCTGCTTAAA
CTGAGTTCAG AGGTGATTAA GCCGTTTTAC AAGCAGAAGT CGCAACGTGC GGTTGAACTG
CTGCAAGAAG CGATTACCGA TGAGCGCTTC CGTATTCACA AACCGGAAGG CGCTATCTTC
TTGTGGTTGT GGTTTGATGA ACTGCCAATA ACAACAATGG AACTGTACCA ACGCTTGAAA
GCGCGTGGCG TATTGATTGT CCCTGGTGAA TATTTCTTTA TTGGTCAGCA AGACGAGTGG
GATCACGCGC ACCAATGCCT GCGTATGAAC TACGTTCAAG ACGATGAGAT GATGCAAAAA
GGCATTGCGA TTATCGCGGA AGAAGTTGAA AAGGCTTACC AACAAGGTCA GTAA
|
|---|
| Protein sequence | MQFSKFGEKF NQYSGITQLM DDLNDGLRTP GAIMLGGGNP AAIPAMLDYF HQASEEMLAS
GELVAALANY DGPQGKDAFV KALAQLFRET YGWDISEKNI SLTNGSQSGF FYLFNLLAGK
QPDGSHKKVL LPIAPEYIGY GDAGIDEDIF VSYHPEIELL DNGLFKYHVD FEQLTVDDSV
TAICASRPTN PTGNVLTDEE VRKLDKLARE NNIPLIIDNA YGLPFPNIIF EDVEPFWNEN
TILCMSLSKL GLPGVRCGIV IASEEITQAL TNMNGIISLA PGSVGPALAN HIIAKGDLLK
LSSEVIKPFY KQKSQRAVEL LQEAITDERF RIHKPEGAIF LWLWFDELPI TTMELYQRLK
ARGVLIVPGE YFFIGQQDEW DHAHQCLRMN YVQDDEMMQK GIAIIAEEVE KAYQQGQ
|
|---|
| |