| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002001 |
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| Symbol | |
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| ID | 8555641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 408684 |
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| End bp | 410768 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 646405005 |
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| Product | periplasmic alpha-amylase |
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| Protein accession | YP_003284629 |
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| Protein GI | 262392775 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CAATTCTCGC ACTCTCTATT GGACTACTGA GCGCCTGCAG CCAGATTCCA
GAAAATGCTA TCGTACTGAG CGTCGGAGAC GATACAGCCG TCTTCGAAGC AAACTCTAAC
GGCTTACTTG TCGCCGAGCA AAAACTCGAA AAAGGCAGCT ACACCTTTAC CATTGCCGAC
AGCAACCAAA CCTGCGGCAG CAGCTTTGCT CTAGCAGAAG AAGATCGCAT CAAATTCAAT
CGTCCATTAA AAATGGATAA TTGCGCCACA GATGCCCAAA TGCCGCTGCG CATCTTCAAA
GCCAACACCT ATCAGTTTAC GCTCAACCCA ACCACTAACG AGCTAACTGT TAGGCTCAAA
CCCAAACAGA ACCAAGACAT CACCTACTCT TGCCCTGTCG CAACTGACGC GCCAAAAACC
ATCAACGTTG AGCAAACCTT TAATGATGGC ACTGTCGTTC GCGATGCCTT AACCGGACAA
CAAGCTACAG TCGCCAATGG CAGCGTAACC ATGCAGCCGG GCCCAATGAG CCAAGGTCTG
TTGTTACTAG AAGAGGTTGA GCAACAAGCA GAAAAACCTT TCAGTTGGGA CAACGCGACG
GTGTACTTCG TCATGACTGA CCGCTTCTAT AACGGCAACC CAGACAACGA CAACAGCTAC
GGTCGCAGCA AAGACGGGAA ATACGAGATT GGTACCTTCC ATGGTGGTGA CTTAGCGGGT
CTGACGAAAA AACTCGATTA CATCGAATCG CTTGGTGTGA ATGCTATCTG GATAACCTCA
CCACTGGAAC AAATCCATGG CTGGGTTGGC GGCGGTGACA AAGGTGACTT TAAACACTAC
GGCTACCACG GCTACTACCA TCAAGATTGG ACCAAGCTTG ATGCCAACAT GGGTTCCGAA
GATGAACTCA GAACCTTCGT CGATACTGCC CACAAGAAAG GCATCCGCGT GATTTGGGAT
GTGGTCATGA ACCACACTGG CTACGCAACA TTAGCAGACA TGCAGGAATT CGGATTTGGT
CAGCTTTACC TTGATGACCA AGAAGCCAAA GAAGTCCTTG GTGAAAAATG GACCGACTGG
CAGCCAAAAT CAGGACAAAG CTGGCACAGC TTCAACGACT ACATCAAATA CAGTGATAGC
GAAGCGTGGG ATAAATGGTG GGGCAAAGGT TGGATCCGCA CCGACATTGG TGACTATGAT
GCACCAGGCT ACAACGACAT CACCATGTCT TTGAACTACC TACCGGATCT CAAAACCGAA
TCGACTCAGA AAACCGGATT ACCAAACTTC TTCCGCAATA AAGACACCAA TGCGCAAGAT
GAGCTGCAAA CCCCACGTGA ACACCTGATT ACCTGGTTAT CCGATTGGGT GCGCGACTAC
GGCATTGATG GCTTCCGCGT CGACACGGCC AAACACGTTG AAATGGAAGC GTGGGCAGAG
TTGAAAGCCA GCACCACCCA AGCGCTTGCC CAGTGGAAGC AAAACAACCC AGACAAAGCC
TTGGATGATT TACCTTTCTG GATGACAGGT GAAGTGTGGG CACACAGCGT GGTGAAGAGC
CCGTATTTCG ATAACGGCTT CGATTCCATC ATCAACTTCG AGTTCCAATC TGACGTAGCA
CCAAAAGCGC TGAAATGCTT CGCTCAACTC GATAGCGATT ATCGCCGCTA CGCGGAACGT
ATTAACTCCG ATCCTGAGTT CAACGTGTTG AGTTACCTGT CTTCGCACGA TACTCAACTG
TTTTGGTCAG CGCGCAGCCG CAGCTTCGAT GACCAAGCAC GTGCCGCAAA TGCACTGATG
CTGGCTCCGG GTGCAGTGCA AATCTACTAC GGCGATGAGA TTGCTCGTGA CTTTGGCGTG
ACTGGCTCCG ATCCTACTCA AGGTACTCGC TCTGATATGC CATGGGATAA GATTCATGGC
GAACGTGAAG ACTTGCTGCA ACATTGGCAA AAACTCGGCG AGTTCCGTCA ACGCCACCCA
GCGGTTGCGC AAGGCAAACA TATCACTCGC AATCAAGAAG GGTATTACGC ATTCGAACGC
CAATACCACG ACGACAAAGT GCTGATCGTC TACACTGGCG AATAG
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| Protein sequence | MKKTILALSI GLLSACSQIP ENAIVLSVGD DTAVFEANSN GLLVAEQKLE KGSYTFTIAD
SNQTCGSSFA LAEEDRIKFN RPLKMDNCAT DAQMPLRIFK ANTYQFTLNP TTNELTVRLK
PKQNQDITYS CPVATDAPKT INVEQTFNDG TVVRDALTGQ QATVANGSVT MQPGPMSQGL
LLLEEVEQQA EKPFSWDNAT VYFVMTDRFY NGNPDNDNSY GRSKDGKYEI GTFHGGDLAG
LTKKLDYIES LGVNAIWITS PLEQIHGWVG GGDKGDFKHY GYHGYYHQDW TKLDANMGSE
DELRTFVDTA HKKGIRVIWD VVMNHTGYAT LADMQEFGFG QLYLDDQEAK EVLGEKWTDW
QPKSGQSWHS FNDYIKYSDS EAWDKWWGKG WIRTDIGDYD APGYNDITMS LNYLPDLKTE
STQKTGLPNF FRNKDTNAQD ELQTPREHLI TWLSDWVRDY GIDGFRVDTA KHVEMEAWAE
LKASTTQALA QWKQNNPDKA LDDLPFWMTG EVWAHSVVKS PYFDNGFDSI INFEFQSDVA
PKALKCFAQL DSDYRRYAER INSDPEFNVL SYLSSHDTQL FWSARSRSFD DQARAANALM
LAPGAVQIYY GDEIARDFGV TGSDPTQGTR SDMPWDKIHG EREDLLQHWQ KLGEFRQRHP
AVAQGKHITR NQEGYYAFER QYHDDKVLIV YTGE
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