| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002000 |
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| Symbol | |
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| ID | 8555640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 406401 |
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| End bp | 408467 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646405004 |
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| Product | glycyl-tRNA synthetase beta chain |
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| Protein accession | YP_003284628 |
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| Protein GI | 262392774 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAG AATTTCTAAT CGAGCTAGGT ACAGAAGAGC TACCACCAAC GCAACTTCGT
ACGCTAGCTG AAGCATTCGC AGCAAACTTC GAAGCAGAAC TAAAAAGCGC TGAGCTTGCT
CACGAAGGCG TGAAATGGTT TGCGGCTCCT CGTCGTCTTG CACTTAAAGT CGCGGCACTA
GCAGAAAGCC AATCAGACAA AATCGTTGAA AAACGTGGCC CTGCGGTTTC TGCAGCGTTT
GACGCGGAAG GCAACCCAAC CAAAGCGGCT CAAGGCTGGG CACGCGGTTG TGGTATTTCT
GTTGACCAAG CAGAGCGCAT GGTTACAGAT AAAGGTGAAT GGCTACTGTT CAAACAAGAA
GTGAAAGGTC AGCCAACGTC TGAGATCGTT GTTGAACTTG CAGCGAAAGC ACTAGCAAAC
CTACCTATCG CAAAACCAAT GCGCTGGGGT AACAAAACAA CTCAGTTCAT CCGTCCAGTT
AAGACGCTAA CCATGCTGAT GGGCAGCGAC CTAATCGAAG GCGAGATCCT TGGTGTCGCT
TCTGACCGCA CTATCCGTGG TCACCGCTTC ATGGGTGAAC AAGAGTTCAC TATCGATTCT
GCTGAGCAAT ACCCTGCGAT CCTAGAAGAG CGCGGTAAAG TAATGGCAGA TTACGAAGCG
CGTAAAGCAA TCATCCTAGC TGACGCACAA AAAGCGGCAG CAGCGGTTGG CGGTATCGCT
GACCTAGAAG ATGACCTAGT AGAAGAAGTC ACGTCTCTGG TTGAATGGCC AGTAGTACTT
ACAGCGAAGT TCGAAGAAGA GTTCCTAAAA GTGCCTTCTG AAGCGTTGGT TTACACCATG
AAAGGTGACC AGAAGTACTT CCCTGTTTAT GACGAAAACA AGAAACTACT ACCTAACTTC
ATCTTCGTAT CGAACATCGA ATCAAAAGAA CCTCGTTACG TAATCGAAGG TAACGAGAAA
GTGGTTCGTC CTCGTCTTGC TGACGCAGAG TTCTTCTTCA ACACAGACCG TAAGCGTCCG
CTTATCGACC GTCTGCCTGA ACTAGAGCAA GCGATCTTCC AAAAGCAACT GGGTACGATC
AAAGACAAAA CAGACCGCAT CACAGAACTT GCTGGCTACA TTGCAGAGCA AATCGGTGCT
GACGTTGAGA AATCAAAGCG TGCTGGTCTA CTAGCAAAAT GTGATCTAAT GACCTCAATG
GTATTCGAAT TCACGGATAC TCAAGGTGTT ATGGGTATGC ACTACGCTCG CCACGACGGT
GAAGCAGAAG AAGTTGCAGT AGCACTGAAT GAGCAATACA TGCCTCGTTT CGCAGGTGAT
GAACTGCCAT CAAACGGCGT TTCAACAGCA GTTGCAATGG CAGACAAGCT AGACACTATC
GTAGGTATCT TCGGTATTGG TCAAGCGCCT AAAGGCAGCG ATCCATTCGC ACTACGCCGC
GCATCTCTAG GTGTACTACG TATCATCGTT GAATACGGCT ACAACCTAGA TCTTGTTGAC
CTAGTAGCGA AAGCGAAGTC ACTGTTTGTC GACCGCCTAA CCAACGACAA CGTTGAACAA
GACGTTATCG AGTTCATGCT TGGTCGTTTC CGTGCTTGGT ACCAAGACGA AGGCTTCAGC
GTAGACATCA TTCAAGCAGT TCTAGCGCGT CGCCCGACGA AACCAGCAGA CTTCGACCAA
CGAGTTAAAG CGGTTTCTCA CTTCCGTGAA CTAGAAGCAG CAGAGTCTCT AGCAGCAGCG
AACAAACGTG TAGGTAACAT CCTAGCGAAA TTCGACGGCG AATTAGCAGC AGACATCGAC
CTAGCACTTC TACAAGAAGA CGCAGAGAAA GCACTAGCAG AAAGCGTTGA AGTAATGACG
GAAGCACTAG AGCCTGCATT TGCGACCGGT AACTACCAAG AAGCCCTAAG CAAGCTAGCA
GATCTACGTG AGCCAGTGGA TGCGTTCTTC GATAACGTAA TGGTAATGGC AGACGACGAA
GCACTTAAGA AGAACCGTCT GACATTGCTG AACAACCTGC GTAACCTGTT CTTACAGGTC
GCAGATATCT CTGTCCTTCA AAAGTAA
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| Protein sequence | MAKEFLIELG TEELPPTQLR TLAEAFAANF EAELKSAELA HEGVKWFAAP RRLALKVAAL
AESQSDKIVE KRGPAVSAAF DAEGNPTKAA QGWARGCGIS VDQAERMVTD KGEWLLFKQE
VKGQPTSEIV VELAAKALAN LPIAKPMRWG NKTTQFIRPV KTLTMLMGSD LIEGEILGVA
SDRTIRGHRF MGEQEFTIDS AEQYPAILEE RGKVMADYEA RKAIILADAQ KAAAAVGGIA
DLEDDLVEEV TSLVEWPVVL TAKFEEEFLK VPSEALVYTM KGDQKYFPVY DENKKLLPNF
IFVSNIESKE PRYVIEGNEK VVRPRLADAE FFFNTDRKRP LIDRLPELEQ AIFQKQLGTI
KDKTDRITEL AGYIAEQIGA DVEKSKRAGL LAKCDLMTSM VFEFTDTQGV MGMHYARHDG
EAEEVAVALN EQYMPRFAGD ELPSNGVSTA VAMADKLDTI VGIFGIGQAP KGSDPFALRR
ASLGVLRIIV EYGYNLDLVD LVAKAKSLFV DRLTNDNVEQ DVIEFMLGRF RAWYQDEGFS
VDIIQAVLAR RPTKPADFDQ RVKAVSHFRE LEAAESLAAA NKRVGNILAK FDGELAADID
LALLQEDAEK ALAESVEVMT EALEPAFATG NYQEALSKLA DLREPVDAFF DNVMVMADDE
ALKKNRLTLL NNLRNLFLQV ADISVLQK
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