Gene VEA_001990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001990 
Symbol 
ID8555630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp401215 
End bp402195 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content48% 
IMG OID646404994 
Productalcohol dehydrogenase 
Protein accessionYP_003284618 
Protein GI262392764 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAATG CTCTAGTTCT AAACCAAGAA GACAAACGCA CTATCGCTAG TATCGAGCAA 
ATCGATGAAA CACAACTGCC GGAAGGCGAC GTTCTGGTTG AGGTCGATTA CTCATCGTTG
AATTACAAAG ATGGTTTGGC GATCACAGGT AAAGGTAAAA TCATCCGTAA CTTCCCGATG
GTACCTGGCA TTGATCTAGC AGGTACGGTT GTAAGTTCTG AAGATTCGCG TTATCAAGCT
GGTGATAAAG TGGTCTTAAC TGGCTGGGGC GTGGGTGAAA ACCATTGGGG TGGCATGGCT
CAACGTGCTC GTCTAAAAGC GGATTGGCTC GTGCCACTAC CAAAAGGTCT AGACAGCAAG
AAAGCAATGA TGGTTGGTAC TGCTGGCTTC ACTGGTATGC TATGTGTTCA AGCACTGCTT
GATGCAGGCA TCAAACCTGA AGCTGGTGAA ATCCTAGTAA CGGGCGCAAG TGGCGGCGTA
GGCTCGGTAG CCGTAACGCT CCTAGCACAG CTTGGCTACA AAGTTGCTGC AGTGACAGGT
CGTGTAGAGA CAAACGGCCC GCTACTTGAA AAACTAGGTG CTAGCCGCAT CATCGACCGC
ACTGAATTTG AAGAACCAGC ACGTCCACTT GAAAAGCAAG TATGGGCAGG TGCGGTAGAT
ACCGTCGGCA GCAAAGTACT AGCAAAAGTA TTGGCGCAAA TGGATTACAA CAGTGCGGTC
GCCGCTTGTG GTCTTGCAGG TGGTTTTGAA CTACCAACTA CAGTGATGCC GTTCATCCTA
CGTAACGTTC GTCTACAAGG TGTGGACTCA GTAATGTGTC CAACAGAGAA ACGCATCGCA
GCATGGGAAA AACTGGTTGA ACTACTACCA GACAGCTATT TCGAGCAAGC GTGTACTGAA
GTAGAACTAG CAGAAGCACC AAAATACGCA GAAGACATCA CCAACGGTCA AGTAACGGGT
CGTGTGGTTA TCAAGCTATA A
 
Protein sequence
MFNALVLNQE DKRTIASIEQ IDETQLPEGD VLVEVDYSSL NYKDGLAITG KGKIIRNFPM 
VPGIDLAGTV VSSEDSRYQA GDKVVLTGWG VGENHWGGMA QRARLKADWL VPLPKGLDSK
KAMMVGTAGF TGMLCVQALL DAGIKPEAGE ILVTGASGGV GSVAVTLLAQ LGYKVAAVTG
RVETNGPLLE KLGASRIIDR TEFEEPARPL EKQVWAGAVD TVGSKVLAKV LAQMDYNSAV
AACGLAGGFE LPTTVMPFIL RNVRLQGVDS VMCPTEKRIA AWEKLVELLP DSYFEQACTE
VELAEAPKYA EDITNGQVTG RVVIKL