Gene VEA_001984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001984 
Symbol 
ID8555618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp387890 
End bp388780 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content43% 
IMG OID646404982 
ProductHTH-type transcriptional regulator IlvY 
Protein accessionYP_003284612 
Protein GI262392758 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATCA AAAGCCTGCA ACTTTTCATT CATCTCTGTG AGAGTAAAAG TTTCGCCAAG 
ACCGCAGCGG CAATGCATAT TAGCCCTTCA GCCTTAAGCC GACAGATACA AAAATTAGAG
GAGGAAACCA GCCAACAATT GTTTTTACGC GACAACCGTA GCGTTGATTT AACTATCCAA
GGTAAAAAGC TAGTCCCAGT TGCCTTAAAG ATTCTTGGCG AATGGCAGCA GTATCAGAGT
CACCTGAAGG GAACCGAGGA TGAATTGAAA GGAGAAATCC GTCTCTTTTG TTCTGTTACT
GCAAGCTACA GCCATCTTCC GGAGCTAATC TCTGACTTTC GTATTCAGAA CCCTTTCATT
GAGTTCAAAC TATCAACCGG CGATCCAGCT CAAGCGATCG ACAAAATACT AGCAGATGAA
GCCGATATTG CCATATCAGC CAAGTCAGAA CAGATGCCAA ATAAAATCGC ATTTGAAACG
ATCAGTGAAA TCCCACTTTC TGTCATCGTA CCTGTTGGGG TTAGTGCGTT TGCTGAAGAG
CTACAAAAAG AAAAACCAGA CTGGTCGGTC ATTCCATTCA TACTCCCAGA AGCAGGAACG
GCAAGGGACA GGGCCAATAC TTGGCTCAAA CAAATGAAAA TAAAGCCAAA GATCTACGCA
CAAACCTCCG GACATGAAGC CATCGTAAGT ATGGTTGCAT TGGGATGTGG AGTAGGTATC
GCACCTGATG TTGTAATCAA CAACAGTCCG GTAAGAGAAA AGATAAATCG TTTAAAAGTC
TTACCAATTA AACCTTTTAA ACTTGGTGTT TGCTGCAACA AAACTCAGCT GGAAAATCCG
CTTGTTAAAG CCTTTTGGAA GGTTGCAGAG AGCAAGTATA TCGCACCTTA G
 
Protein sequence
MNIKSLQLFI HLCESKSFAK TAAAMHISPS ALSRQIQKLE EETSQQLFLR DNRSVDLTIQ 
GKKLVPVALK ILGEWQQYQS HLKGTEDELK GEIRLFCSVT ASYSHLPELI SDFRIQNPFI
EFKLSTGDPA QAIDKILADE ADIAISAKSE QMPNKIAFET ISEIPLSVIV PVGVSAFAEE
LQKEKPDWSV IPFILPEAGT ARDRANTWLK QMKIKPKIYA QTSGHEAIVS MVALGCGVGI
APDVVINNSP VREKINRLKV LPIKPFKLGV CCNKTQLENP LVKAFWKVAE SKYIAP