| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001980 |
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| Symbol | |
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| ID | 8555614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 381455 |
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| End bp | 382558 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646404978 |
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| Product | probable RND efflux membrane fusion protein |
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| Protein accession | YP_003284608 |
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| Protein GI | 262392754 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.979341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGT GGATTTTGAT GCTATCAATT GTTTTATTGC TTTTTGGTAG TGTTGTGACA
TACAGACTAA TTGATATCAA AGACAAAATG GAACAGTTTG CCAATCGCCC TGAACCAGCA
TTCCCAGTAA CCGTAACTGA AGTACAAGCG GTTGATTGGG TTCCTGCTAT AGAGGCAATT
GGCTTTATTG AACCAAACCA AGGGGTTACC GTTGCTAATG AAACTAGCGG TGTTATCGAC
AAAATCGCAT TTGATTCCGG TACTCAAGTC AAAGCAGGCC AGCCATTAGT ACTGCTTGAC
TCTGACGTTG AGAAAGCGAA TTTAAAGAGC TCGCAAGCCA AGTTGCCAGC AGCAGAAGCG
AAATACAAAC GCTACCAAGG GCTATTTAAA AAAGGCTCTA TTTCTAAAGA AGCGTATGAC
GAAGCAGAAG CGAACTACTT CTCCTTAAAA GCGGACATTG AAAGCTTGAA AGCGACCATC
GACCGACGCG AAATCAAAGC GCCATTTGAT GGTGTGGTAG GTATTCGTAA CGTGTACCTA
GGTCAGTACC TACAAGCGGG TACTGATATT GTTCGCCTGG AAGACACCAG CGTGATGCGC
TTACGCTTTA CCGTGCCGCA AACCGATATT TCACGTATCA ACATCGACCA AGAAGTGGAT
ATCTTCGTGG ATGCCTACCC AGAACAGCCT TTCAAAGGTT CAATTTCTGC GATTGAGCCT
GCGGTTAACG TACAAAGTGG CTTGATTCAG GTTCAAGCAG ATATCCCTAA CAGTGATGGC
AAACTGCGTA GTGGTATGTT CGCACGTGCA AACATCATTC TGCCTAAATT AGAAAATCAG
GTCACTCTGC CTCAAACTGC GATCACGTTT ACGCTATACG GCGACAATGT TTACATCGTA
ACGGAAGAAG ATGGCGAGAA ACGCGTTAAG CAGCATGTGG TAAAAGTTGG CGAACGCTCT
AAAGATATCG CACACATTCT AGAAGGCGTG AAGCCAGGTG ATGTAGTGGT GACATCGGGT
CAAGTCCGTT TAAGTAACCA CGCAAAAGTA AGCATTGTCG AAAGCGATGC AACTACCCCA
CCTGCTGAAA CACCAATGCT TTAA
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| Protein sequence | MKKWILMLSI VLLLFGSVVT YRLIDIKDKM EQFANRPEPA FPVTVTEVQA VDWVPAIEAI
GFIEPNQGVT VANETSGVID KIAFDSGTQV KAGQPLVLLD SDVEKANLKS SQAKLPAAEA
KYKRYQGLFK KGSISKEAYD EAEANYFSLK ADIESLKATI DRREIKAPFD GVVGIRNVYL
GQYLQAGTDI VRLEDTSVMR LRFTVPQTDI SRINIDQEVD IFVDAYPEQP FKGSISAIEP
AVNVQSGLIQ VQADIPNSDG KLRSGMFARA NIILPKLENQ VTLPQTAITF TLYGDNVYIV
TEEDGEKRVK QHVVKVGERS KDIAHILEGV KPGDVVVTSG QVRLSNHAKV SIVESDATTP
PAETPML
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