Gene VEA_001979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001979 
Symbol 
ID8555613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand+ 
Start bp380855 
End bp381436 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content43% 
IMG OID646404977 
Producttranscriptional regulator TetR family 
Protein accessionYP_003284607 
Protein GI262392753 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.507988 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGATA ACCCTGCTGT AGATAAGCGA GAACAAATCT TAGTCGCTGC AGAGCAACTC 
ATTGCTGAAT CGGGCTTTCA AGGGCTTTCC ATGCAAAAGC TCGCCAATGA AGCAGGTGTC 
GCAGCAGGAA CGATTTATCG TTATTTCTCA GATAAAGAAC ATCTTTTGGA GGAATTACGC 
CTTAACGTTG CAAAGCGTGT CGCTACGGCT GTGCAACTGG GCGTGAGTGA AGAGATGCCT 
TTAAAACAGC GATATCGAAC CATGTGGCTC AATATTTGGA ATCTAGCGAG CTCGAATTTA 
AATGCGCTCA GCAATCGAGT TCAATATGAA TCTCTACCCT GTTCAAATAG TAGCAAAACT 
CGGGAACTTG AAAGACAAAT GTTTGCCCAA GTAGATCTTC TTTTTAATCA GGGGAAAGAA 
GAGGGCGTAT TCAAGCCTCT CGATAACGAA GTGCTTTCTG GATTGAGTTT TGAGGCAAGT 
GTTGCACTTG CTAGGAAACA CGCTTTGGGA TTTTATCAAC TGGATAAGGC GGCATTAGAA 
GCTGCTATTG AAGCCAGTTG GGATGCAATT ATTAAACACT AA
 
Protein sequence
MKDNPAVDKR EQILVAAEQL IAESGFQGLS MQKLANEAGV AAGTIYRYFS DKEHLLEELR 
LNVAKRVATA VQLGVSEEMP LKQRYRTMWL NIWNLASSNL NALSNRVQYE SLPCSNSSKT 
RELERQMFAQ VDLLFNQGKE EGVFKPLDNE VLSGLSFEAS VALARKHALG FYQLDKAALE 
AAIEASWDAI IKH