| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001978 |
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| Symbol | |
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| ID | 8555612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 378671 |
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| End bp | 380686 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646404976 |
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| Product | ATP-dependent DNA helicase Rep |
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| Protein accession | YP_003284606 |
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| Protein GI | 262392752 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0682973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTGA ACCCTAGTCA AGATGAAGCC GTGAAATACG TGTCTGGTCC ATGCCTAGTG
CTAGCTGGTG CTGGCTCGGG CAAAACTCGT GTTATTACCA ATAAAATCGC TTATCTGGTT
CAGCAATGTG GCTACAAAGC GCGTAATATT GCAGCGGTGA CGTTTACCAA CAAAGCGGCG
CGTGAAATGA AAGAACGTGT CGGCCAAACG TTGGGGAAAG CTGAGTCTAA AGGTTTGATG
GTATCAACGT TCCACACCTT GGGATTAAAC ATCATCAAAC GCGAATACAA GCATTTAGGA
TTGAAAGCGG GCTTTTCACT GTTTGATGAC CAAGACCAAC TGGCGCTACT CAAGGAACTT
ACCGAAAAGC AGCTTGATGG TGATAAAGAC CTGCTACGTC AGCTTCTGAG TTGTATTTCC
AATTGGAAAA ACGACATGTT GACGCCAGAG CAAGCCAAAG CGCGTGCGCA AGGTGAGCAG
CAACAATTGT TTGCGTTCTG CTTTGATATG TACCAAAAGC AAATGAAAGC CTATAACGCG
CTCGATTTTG ATGACCTAAT TTTGATGCCC GTCTTACTCT TGCGCAATCA TGAAGACGTT
CGTCAACGTT GGCAGAACCG TATCCGCTAT CTGTTGGTCG ATGAGTACCA AGATACCAAC
ACGAGCCAAT ATGAGTTGGT GAAATTAATC GTCGGTGAAC GTGGGCGATT GACGGTCGTA
GGAGATGATG ACCAGTCCAT TTATTCATGG CGTGGTGCGA AGCCTCAGAA CCTAGTCTTG
CTGGGTGAAG ATTACCCGAA TTTGCGATTG ATTAAGTTGG AGCAAAACTA CCGCTCTACG
AGTCGAATCC TGCGTGCGGC CAACATTTTG ATAGCCAACA ACCCTCACGT CTATGAGAAG
TCCTTATTTT CAGAAATTCC TGACGGTGAA AAACTCAAAG TGTTGTTGGC TAAAAATGAA
GAGCACGAGG CTGAGCGTGT CACGGGGGAG TTGATTGCAC ACAAATTCTT GAATCGAACC
GACTATCGTG ATTACGCAAT TTTGTACCGT GGTAACCACC AATCGCGCTT AATTGAAAAG
TCTCTGATGC AAAACCGTGT GCCTTATAAA ATTTCTGGCG GCACCTCGTT TTTTGCACGC
GTAGAAATTA AAGACATCAT GGCGTATTTG CGTGTTTTGG TTAATCCAGA TGACGACAAT
GCATTCTTAC GTATTGTGAA TACACCACGA CGTGAAATTG GCCCAGTAAC GTTAGAAAAG
CTAGGCAGTT ATGCCAATAT GCGTGGGAAG AGCCTGTTTG AGTCGAGTTT TGAAATGGGG
CTCGAACAGC ACTTAACGGG ACGCGGCCTG GAAAACTTAC GTCGTTTCAC TCAATGGTTA
GTGGCGATTG CTGACCAAGC TGAGCGTGGC GATACCGTCG AAGCGGTTCG CTCCTTGGTT
CGCGATATCC ATTACGAAGA TTGGTTATAC GAAACTTCAG CAAGCCCGAA AGCCGCTGAA
ATGCGAATGA AGAACGTTTC TGATCTTTAC TCCTGGATAG TGGCGGACCT AGAAGGTGAC
AACTACGATC AAGAAGAGAA AACGTTAAAA GAAGTCGTTC AACGTTTGAC CTTGCGTGAC
ATGATGGAAC GTGGCGAAGA AGATGAAGAC AGCGATGCAG TACAACTGAT GACGCTGCAT
GCATCAAAAG GCCTTGAGTT CCCATATGTA TACTTAATTG GGTCTGAAGA AGGTATTTTA
CCGCACCAAA CCAGTATTGA TGAAGACAAC GTCGAAGAAG AGCGTCGTCT GATGTATGTT
GGCATTACCC GTGCGCAGCG TGAACTGACT TTCACTATGT GCAAAGAGCG TCGACAGTTC
GGCGAGTTGA TCAAACCGAC GCAAAGCCGC TTTTTGGATG AGTTGCCATT TGATGACGTT
GAATGGGAAG TAAACAAAAA GCCAGTATCA GCAGAAGAGC GTATGGCGAA AGGTCAGGCA
CACATTGCCA ATATTCGAGC AATGTTTAAG AAGTAG
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| Protein sequence | MKLNPSQDEA VKYVSGPCLV LAGAGSGKTR VITNKIAYLV QQCGYKARNI AAVTFTNKAA
REMKERVGQT LGKAESKGLM VSTFHTLGLN IIKREYKHLG LKAGFSLFDD QDQLALLKEL
TEKQLDGDKD LLRQLLSCIS NWKNDMLTPE QAKARAQGEQ QQLFAFCFDM YQKQMKAYNA
LDFDDLILMP VLLLRNHEDV RQRWQNRIRY LLVDEYQDTN TSQYELVKLI VGERGRLTVV
GDDDQSIYSW RGAKPQNLVL LGEDYPNLRL IKLEQNYRST SRILRAANIL IANNPHVYEK
SLFSEIPDGE KLKVLLAKNE EHEAERVTGE LIAHKFLNRT DYRDYAILYR GNHQSRLIEK
SLMQNRVPYK ISGGTSFFAR VEIKDIMAYL RVLVNPDDDN AFLRIVNTPR REIGPVTLEK
LGSYANMRGK SLFESSFEMG LEQHLTGRGL ENLRRFTQWL VAIADQAERG DTVEAVRSLV
RDIHYEDWLY ETSASPKAAE MRMKNVSDLY SWIVADLEGD NYDQEEKTLK EVVQRLTLRD
MMERGEEDED SDAVQLMTLH ASKGLEFPYV YLIGSEEGIL PHQTSIDEDN VEEERRLMYV
GITRAQRELT FTMCKERRQF GELIKPTQSR FLDELPFDDV EWEVNKKPVS AEERMAKGQA
HIANIRAMFK K
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