| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001976 |
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| Symbol | |
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| ID | 8555605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 376227 |
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| End bp | 376952 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646404969 |
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| Product | 2-haloalkanoic acid dehalogenase |
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| Protein accession | YP_003284604 |
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| Protein GI | 262392750 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR02253] HAD superfamily (subfamily IA) hydrolase, TIGR02253 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000579937 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCTTAAAG CGATTTTTTT TGATATGGAC GAGACTTTAT GTGCGACGTC ACAAGCCGAT
AAAGTTGCAG GACAAAAGTT TACGACTTGG ATTCATAAGA CCTACCCGCA AGTTACCGAA
CCACAAGCTT TTTTACAGCG CTACTTACAG GGTGTGTACA AGAAGCTGAA TGCGGAATTC
CCTCACCTTG TGGCTCTGCT ACCTGATGAA AACGCGTTCC GTTGTGGCCT GATCCAAAAC
ATATTGGCGG AGCACGGAGT CAGCATTAAT GCCGAAGAGG CTCAACAAGC TCAAGACTAC
TTTGACTCTG CACGTATGGG CGCGTTCACT TTCTTCCCTG GTGTAAAAGA AATGCTCAGC
GATCTTCGTC AGCATTATAA ACTCGTCGTG ATCACTAACG GCCCGATTTT TTCTCAACAC
CCAAAACTCA ACGCGACACA GATGAGCGAC TGGGTGGACC ATATTATTGT GGGGGGAGAA
GAGCCTGAGG AAAAGCCTGC TGCGAGTATT TTTCAAAAAG CGCTCGACTT GGTCGAAGTA
AAACCAGAAG AAGCCCTACA CATTGGCGAC TCTTTACCAG CAGATATAGC AGGCGCTAAC
AATATGGGCA TTTTGAGTGT GTGGGTAAAT GCGACAGGCG CAAGTAACTC AACAGATATA
ACGCCAAATT TTGAAATCCA AGAAACGGTA GAGCTGAGAG AAATCCTTAA AACACTCGCC
CAATAA
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| Protein sequence | MLKAIFFDMD ETLCATSQAD KVAGQKFTTW IHKTYPQVTE PQAFLQRYLQ GVYKKLNAEF
PHLVALLPDE NAFRCGLIQN ILAEHGVSIN AEEAQQAQDY FDSARMGAFT FFPGVKEMLS
DLRQHYKLVV ITNGPIFSQH PKLNATQMSD WVDHIIVGGE EPEEKPAASI FQKALDLVEV
KPEEALHIGD SLPADIAGAN NMGILSVWVN ATGASNSTDI TPNFEIQETV ELREILKTLA
Q
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