Gene VEA_001943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001943 
Symbol 
ID8555572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp336028 
End bp337221 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content48% 
IMG OID646404936 
ProductNAD(FAD)-utilizing dehydrogenase 
Protein accessionYP_003284571 
Protein GI262392717 
COG category[R] General function prediction only 
COG ID[COG2081] Predicted flavoproteins 
TIGRFAM ID[TIGR00275] flavoprotein, HI0933 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAGA AATTTGATGT TGTTGTAATT GGCGCAGGTG CAGCGGGTTT GATGTGTGCT 
GCAGAAGCCG GCAAGCGAGG CCGCCGTGTT TTGGTGCTCG ATCATGCTAA AAAGCCAGGA
CGTAAAATCC TTATCTCAGG CGGTGGCCGT TGTAACTTCA CTAATTACGA CGTCTCAGCC
AGCAACTACC TATGCCAAAA CCCGCATTTC GTTAAGTCGG CGCTTTCTCA ATACACCAAC
TGGGATTTTA TCTCGATGGT GTGTAAGCAT GGTATTGAAT TTGAAGAGCG CGATCACGGT
CAGCTGTTTT GTGTCGATGC GTTTACGGCG AAAGACATCG TGAAGATGCT GCTGGCTGAA
TGTGATATGC CGAATATCGA GCAGCGTTAC CAATGCGATG TTCACTCAAT TGAGAAAATC
GATGAAGGCT TTCGTTTGCA TGCTGGCACT GAGATTGTTG AGTGTGAGTC TTTAGTTATC
GCAACAGGTG GCTTGTCGAT GCCAAAACTG GGGGCGACAC CATTTGGCTA TAAAGTCGCG
GAACAATTTG GTCTTCGAGT TATCCCAACT ACGGCAGGGC TGGTGCCATT TACGTTGCAT
AAAGAAGACA AAGAAGATTT TGCTGAGTTA TCTGGTATCG CGGTACCTGC GGAAATTACA
GCTGAAGATG GCACCATGTT CAAAGAAGCC CTGTTGTTCA CACATCGTGG TTTATCTGGC
CCAGCCGTTT TACAGATTTC ATCATTCTGG CGAGCGGGGC AAAAGGTGTC GATTAATCTG
GTGCCAAACG ATGATGTTGC CGAGTTATTA GAACGCAGCC GTGAAAAGCA TCCGAATCAG
TCGCTCAAAA ATACGCTCGC TAAAGTGCTA CCAAAGCGCT TGGTTGAAGT CTTGATTGAA
CGTAAAGAGC TGGTCGATAA ACCGCTAAAG CAGTTCAATC AAAAGGAGCT TGCGGCGATT
GTGGCGCGCT TAGAACATTG GGATATCGCC CCTAATGGCA CTGAAGGCTA CCGAACCGCG
GAAGTGACAC TAGGCGGTGT GGATACCGAT CACTTATCTT CGAAAACCAT GGAATGCAAA
GACATCAAAG GGCTGTACTT CATTGGCGAA GTGATGGATG TGACTGGCTG GTTAGGGGGC
TACAATTTTC AGTGGTGCTG GTCGAGCGGC TTTGTCGCGG GTCAGTGGGT GTAA
 
Protein sequence
MSKKFDVVVI GAGAAGLMCA AEAGKRGRRV LVLDHAKKPG RKILISGGGR CNFTNYDVSA 
SNYLCQNPHF VKSALSQYTN WDFISMVCKH GIEFEERDHG QLFCVDAFTA KDIVKMLLAE
CDMPNIEQRY QCDVHSIEKI DEGFRLHAGT EIVECESLVI ATGGLSMPKL GATPFGYKVA
EQFGLRVIPT TAGLVPFTLH KEDKEDFAEL SGIAVPAEIT AEDGTMFKEA LLFTHRGLSG
PAVLQISSFW RAGQKVSINL VPNDDVAELL ERSREKHPNQ SLKNTLAKVL PKRLVEVLIE
RKELVDKPLK QFNQKELAAI VARLEHWDIA PNGTEGYRTA EVTLGGVDTD HLSSKTMECK
DIKGLYFIGE VMDVTGWLGG YNFQWCWSSG FVAGQWV