| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001928 |
|---|
| Symbol | |
|---|
| ID | 8555557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 321750 |
|---|
| End bp | 323282 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 646404921 |
|---|
| Product | DNA recombination protein RmuC |
|---|
| Protein accession | YP_003284556 |
|---|
| Protein GI | 262392702 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1322] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATGGA TTCTTGAGTA CCAATCTCTC ATTCTCTCTT CTCTTTGCGC TGCCACGCTT
AGTGGTGTCG CCGTCGGTTG GTGGGTGAAA CAGCGTTTTA TCACCCAAAC TCAGCTTCTC
GAACAACAAC TTGTTTCAGA AAAGCAGCTT CACCAACAGC AGCTTGAACA GGTTAAACAA
AGCCTTGCCG ATGCCCAGCA AGAGTTGGAT GAATTAGATG ATGAGCGCGA TAAAGCTGCG
TTTGAAGTAC GCCAAACACA CGGAAAGCTG ATGGCCGCAA TGGAAAAACT GCGTTACTTC
GAGGCTGTAA AGCAAGAGCG CCAGCAATAC TTTGATGAGC TTGGTCAGAT GCGTGAGCAC
AAATCACGTC TAGAAACGCA ACTACGTGAG CAGCAAGCAC GTCATGAGCA AATCAACCAA
GCCAATGCCG AAAAACTGCA AATTCTAGAG CAAGCGGAAG CGCGCCTGAA ACAGCAATTT
GAGCACTTGG CCAACCAACT GTTTGAAGAA AAAACCGCGA AGGTCGACTT GCAAAACCGT
CAGAGTTTGG AAGGTTTGTT GTCACCGCTC CGAGAGCAGC TAGAAGGATT CAAAAAGCAC
GTTAATGACA GCTTTAGCCA AGAAGCTAAA GAGCGCCATA CCTTAGTGCA TGAGCTCAAA
AACCTTCAAC GTTTGAATGA GCAAATGACG CGAGAAGCGG TTAATTTGAC CCAAGCGTTG
AAAGGGGACA ACAAGCAGCA AGGTAACTGG GGCGAAGTGG TGCTCGCTAG GGTACTTGCC
GAGTCGGGAC TGCGTGAAGG GCACGAATAT CAGACTCAGG TGAATTTGCA AAATGAAGCA
GGCAAGCGCT ACCAACCTGA TGTGATTGTT CATCTCCCAC AAAACAAACA AGTGGTTGTG
GATTCCAAAA TGGCGCTAGT CGCCTATGAG CGCTATTTCA ACGCCGAAAC TGATGCCGAT
CGAGATCAGG CTTTGAGTGC GCACTTAGCC GCACTGCGTG CTCACATTAA GGGTTTAAGC
ATGAAGGACT ACCACAAACT CAAAGGTATT CAGAGTTTGG ACTATGTGCT GATGTTTATT
CCGGTTGAGC CTGCTTTCCA AGTCGCGATT CAAGCCGATC CAAGTTTGAT CAAAGACGCG
ATGGAGCAAA ACATCATTTT GGTGAGCCCA ACAACGTTGC TGGTGGCACT GCGCACCATT
GATAATCTAT GGCGCAATGA ACGCCAGAAT GAAAACGCCA AAATGATTGC GCAGCGCGCG
ACAAAACTCT ACGACAAATT ACGATTGTTT GTGGACGACA TGGAAGGGCT CGGCGGTGCG
CTGGATAAGG CGAATCAAAG CTATCAAGGC GCAATGAACA AGCTTGCCAC AGGGCGCGGG
AATGTGATTC GTCAAGCCGA AAGCTTTAAG CACCTTGGGG TTGAAATCAA ACGACCAATT
TCTTCTGACC TCGCACAGTT AGCGCAGAGT GATTCATTTT CAGAAAATGA CCCGTTAGTA
GAAAGACATC CGGCTGAGGA TAAAGTAAAC TAA
|
|---|
| Protein sequence | MQWILEYQSL ILSSLCAATL SGVAVGWWVK QRFITQTQLL EQQLVSEKQL HQQQLEQVKQ
SLADAQQELD ELDDERDKAA FEVRQTHGKL MAAMEKLRYF EAVKQERQQY FDELGQMREH
KSRLETQLRE QQARHEQINQ ANAEKLQILE QAEARLKQQF EHLANQLFEE KTAKVDLQNR
QSLEGLLSPL REQLEGFKKH VNDSFSQEAK ERHTLVHELK NLQRLNEQMT REAVNLTQAL
KGDNKQQGNW GEVVLARVLA ESGLREGHEY QTQVNLQNEA GKRYQPDVIV HLPQNKQVVV
DSKMALVAYE RYFNAETDAD RDQALSAHLA ALRAHIKGLS MKDYHKLKGI QSLDYVLMFI
PVEPAFQVAI QADPSLIKDA MEQNIILVSP TTLLVALRTI DNLWRNERQN ENAKMIAQRA
TKLYDKLRLF VDDMEGLGGA LDKANQSYQG AMNKLATGRG NVIRQAESFK HLGVEIKRPI
SSDLAQLAQS DSFSENDPLV ERHPAEDKVN
|
|---|
| |