| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001920 |
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| Symbol | |
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| ID | 8555549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 315871 |
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| End bp | 316632 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646404913 |
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| Product | deoxyribonuclease TatD |
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| Protein accession | YP_003284548 |
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| Protein GI | 262392694 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGATA CCCACGCGCA CATCTATGCC AGCGAATTTG ATAACGACCG CGATGAAGTA
GTACAACGCG CCTTAGCGCA AGGCATTAAT AAGATCCTGT TGCCAAACAT CGATCTGGAC
TCTATTGAGC CCATGCTACA AACCGAAGCG GCATATCCTG ACGTGTGCCA CTCAATGATG
GGACTCCACC CTTGCTATGT GGATAACAAC GTTGAGCAAA CGTTGGAAAT CATCCGCGGC
TGGTTTGAGA AACACAAGTT TATTGCGGTG GGCGAAATTG GTATCGACCT GTATTGGGAC
AAAACCTATC GCGCCGAGCA AGAGATGGCA TTCGTGACTC AGCTAAACTG GGCAAAAGAG
ATGGATTTAC CAGTCGTTAT CCACACTCGT GATTCGATTG AAGAAACACT CACTTTGCTA
AGACAAGAGC AAGATGGTCG TCTGCGTGGT GTATTCCACT GTTTTGGAGG CAGCTTAGAA
GAAGCGCAAG CAATCAATGA GCTAGGCTTC CACTTAGGCT TGGGTGGCGT ATCGACCTTT
AAGAATGGCG GGATGGATAA AGTCATTCCA CATTTGGATA TGCAGTGGGT CATTTTAGAA
ACCGATTGTC CATACTTAGC GCCAGTACCG CACCGTGGTA AGCGTAATGA ACCAGCCTAC
ACTTCTCTCG TTGCACAACG TGTTGCCGAC TTGCGTGATG TCGATGTCGC AACTATCGAT
GCAATAACGA CTGAAAATGC CAAAAAGCTG TTTAATATTT AA
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| Protein sequence | MIDTHAHIYA SEFDNDRDEV VQRALAQGIN KILLPNIDLD SIEPMLQTEA AYPDVCHSMM
GLHPCYVDNN VEQTLEIIRG WFEKHKFIAV GEIGIDLYWD KTYRAEQEMA FVTQLNWAKE
MDLPVVIHTR DSIEETLTLL RQEQDGRLRG VFHCFGGSLE EAQAINELGF HLGLGGVSTF
KNGGMDKVIP HLDMQWVILE TDCPYLAPVP HRGKRNEPAY TSLVAQRVAD LRDVDVATID
AITTENAKKL FNI
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