Gene VEA_001916 details

Gene Information

• Locus tag: VEA_001916
• ID: 8555545
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: +
• Start bp: 309248
• End bp: 309907
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 646404909
• Product: GTP-binding protein EngB
• Protein accession: YP_003284544
• Protein GI: 262392690
• COG category: [R] General function prediction only
• COG ID: [COG0218] Predicted GTPase
• TIGRFAM ID: [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00788196
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCGTAA AAATTCATTA CCAAAATACG CATTTCATCA CCAGCGCACC CGATATTCGT 
CACCTACCGG AAGACGAAGG TGTCGAAATT GCGTTTGCAG GACGCTCAAA CGCTGGTAAA 
TCGAGTGCAC TTAACCGTCT AACTAATCAA AAAAGCTTAG CCAAGACATC AAAGACACCT 
GGTCGTACGC AATTAATCAA CCTTTTCAAA GTAGAAGAAG GTTGTCACAT TGTCGATCTA 
CCTGGATACG GTTTTGCTCA AGTACCGGTA GAGATGAAAA ACAAATGGCA GAAATCTTTA 
GGTGAATACC TACAGAAACG CGAGTGCCTA AAAGGCTTAG TGGTTCTGAT GGACATTCGT 
CATCCAATGA AAGATCTCGA CCAGCAAATG ATTTTCTGGG CCATCGATAG CCACATTCCT 
GTGCAAGTTT TGCTAACCAA AGCAGATAAA CTAAAAAGTG GCGCACGCAA ACAAACCCTG 
CTGAAAGTTC GCAAACAGGT GGAAACTTTC GGTGGCGACG TTTCCGTTGA TGTGTTCTCT 
TCCCTTAAAG GATTAGGCGT TGATCAGCTG CGCGCAAAAC TGGATACCTG GTTTGCACCG 
GCGCTCGCAC ACCTGATAGA AGAAGGCGAA CTGGATACCC CAGCAAGCGA CGAAGAATAA 

 

Protein sequence

MSVKIHYQNT HFITSAPDIR HLPEDEGVEI AFAGRSNAGK SSALNRLTNQ KSLAKTSKTP 
GRTQLINLFK VEEGCHIVDL PGYGFAQVPV EMKNKWQKSL GEYLQKRECL KGLVVLMDIR 
HPMKDLDQQM IFWAIDSHIP VQVLLTKADK LKSGARKQTL LKVRKQVETF GGDVSVDVFS 
SLKGLGVDQL RAKLDTWFAP ALAHLIEEGE LDTPASDEE