Gene VEA_001899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001899 
Symbol 
ID8555528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp290641 
End bp291075 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content49% 
IMG OID646404892 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_003284527 
Protein GI262392673 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.784123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATAGCGC TAATTCAACG AGTCAGTGAA GCTGCCGTCC GTGTGGATGG TGAAGTCGTA 
GGGGAAATTG ATCGTGGTCT GCTGGTCTTA TTAGGAGTAG AGAAAGACGA CGATGAGGCC
AAAGCAAAAC GCTTGATGGA GCGTGTTACG ACCTACCGCG TGTTCGAAGA TGATGAAGGT
AAGATGAACC TGAACGTCAA ACAGGTAGAA GGCAAAGTGC TGGTGGTTTC TCAATTTACG
TTACCTGCGG ATACAAAAAA AGGCACTCGT GCTGGCTTTT CTCGCGGTGC GCATCCTGCT
GATGCTGAGC GCTTGTATGA TTACTTTTCT GATTTGTGTG AACAAGTTTT ACCCACACAG
CGTGGCCGCT TCGCTGCCGA TATGAAAGTG TCCTTAGTGA ATGACGGTCC GGTGACGTTT
TGGTTGCAGG TCTAG
 
Protein sequence
MIALIQRVSE AAVRVDGEVV GEIDRGLLVL LGVEKDDDEA KAKRLMERVT TYRVFEDDEG 
KMNLNVKQVE GKVLVVSQFT LPADTKKGTR AGFSRGAHPA DAERLYDYFS DLCEQVLPTQ
RGRFAADMKV SLVNDGPVTF WLQV