| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001889 |
|---|
| Symbol | |
|---|
| ID | 8555518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 277619 |
|---|
| End bp | 278062 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 646404882 |
|---|
| Product | general secretion pathway protein G |
|---|
| Protein accession | YP_003284517 |
|---|
| Protein GI | 262392663 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
|---|
| TIGRFAM ID | [TIGR01710] general secretion pathway protein G
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTA AGCGTAGTAA ACAACACGGT TTCACACTTT TAGAAGTGAT GGTTGTTGTC
GTTATCCTTG GTATTTTGGC AAGTTTCGTT GTTCCAAACC TATTGGGTAA CAAAGAGAAG
GCTGACCAAC AAAAAGCGAT TACGGACATC GTAGCGCTGG AAAATGCCCT AGATATGTAC
AAGTTGGATA ACAGCGTTTA CCCAACGACA GACCAAGGCC TGGAAGCATT AGTTAGCAAG
CCTTCTAACC CAGAGCCTCG CAACTACCGT GATGGCGGTT ACATCAAACG TCTTCCTAAT
GACCCTTGGG GTAACCAGTA CCAGTACCTA AGCCCAGGCG ATAACGGTAC GATTGATATC
TTCACTCTAG GCGCAGATGG CCAAGAGGGT GGAGAAGGTC CAGCTGCAGA TATTGGCAAC
TGGAATATGC AAGATTTCCA ATAA
|
|---|
| Protein sequence | MKFKRSKQHG FTLLEVMVVV VILGILASFV VPNLLGNKEK ADQQKAITDI VALENALDMY
KLDNSVYPTT DQGLEALVSK PSNPEPRNYR DGGYIKRLPN DPWGNQYQYL SPGDNGTIDI
FTLGADGQEG GEGPAADIGN WNMQDFQ
|
|---|
| |