| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001888 |
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| Symbol | |
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| ID | 8555517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 276986 |
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| End bp | 277588 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646404881 |
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| Product | general secretion pathway protein H |
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| Protein accession | YP_003284516 |
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| Protein GI | 262392662 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGAAAAC ACAATGGTTT TACATTGATA GAAATTCTAT TGGTGCTGGT TTTGCTATCC
CTCACGGCAG TGGCCGTGAT CTCGACATTA CCGACCAGCC AAAAAGATCT TTCCAAACAG
TATGCTCAAA GCTTTTTTCA GCGTTTACAG CTGCTTAACG AAGAGGCAGT ACTAAGCGGT
AAAGACTTTG GCGTTCGAGT GGATGACGCT AAATCAACGT ACGCTCTACT GAGTTTGACC
GCGGAAGGTT GGCAGCCTCT GGAGTTAAAG CAGATTCCGA GCAAAACCAA GTTGGAAGAT
GACATTACGC TACTGCTCGA GCTAGGTGGC GGTGCTTGGG ATAATGATGA TCGCTTATTC
AAACCGGGCT CTCTTTTTGA TGAAGACATG TTTGCTGAAG AAGACGACGA CGAAAAGAAA
GTTAAGCCAC CGCAAGTGTT TATCTTTTCC AGTGCAGAGG TTACGCCATT TACTCTGTCT
TTTTTTCCGC AAAATGGTGA CGCCTTTAAT GACGGGTGGC GAGTCATCGG AAAAGAAAGT
GGACAAATCT TGTTACTAGC GCCGGGCGAA GAAGTGAAAG AGGATGAGAA TGCGCAATTC
TAA
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| Protein sequence | MRKHNGFTLI EILLVLVLLS LTAVAVISTL PTSQKDLSKQ YAQSFFQRLQ LLNEEAVLSG
KDFGVRVDDA KSTYALLSLT AEGWQPLELK QIPSKTKLED DITLLLELGG GAWDNDDRLF
KPGSLFDEDM FAEEDDDEKK VKPPQVFIFS SAEVTPFTLS FFPQNGDAFN DGWRVIGKES
GQILLLAPGE EVKEDENAQF
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