| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001886 |
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| Symbol | |
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| ID | 8555515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 275946 |
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| End bp | 276623 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646404879 |
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| Product | general secretion pathway protein J |
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| Protein accession | YP_003284514 |
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| Protein GI | 262392660 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGGCGCA ATAAGAATCC ACGCGCAAGT AAGCGCCAAC TGGCAAAAGG TTTTACACTT
ATTGAAGTGT TGGTCTCGAT TGCCATCTTT GCCAGTTTAA GTGTCGCCGC GTATCAAGTG
GTATCGCAAG TGCAGCGCAG CAATGCGCTA TCACAAGAGC GAACTCAGCG CTTAAATGAA
ATTCAGCGCG CCATGGTGAT GATGGATAAT GACTTTCGTC AAATGGCGAT GCGCCAAACG
CGGACAAATG GTGAAGAGCC CGCGAGCCAA CTGATTTTTT GGTCAGATTA CTTGCTCGAC
TCCGACACTA AAGGGCTAAT GTTTGCTCGT TTAGGATGGC ACAACCCTCA ACAGCAGTTT
CCCCGAGGGG AGGTCACTAA GGTTGGCTAT CGTTTAAAAG AAGAAACATT ACAACGAGTA
TGGTGGCGCT ACCCTGACAC GCCAGTGGGT CAACAAGGCA TCGTTACCCC ATTGCTGACG
CAGGTCGAAT CGTTTGATAT GCGTTTTTAC GATGGTAAAC AATGGAAAAA AGAGTGGGAT
GATGAAAAAT CGCTACCGAA AGCGGTTTCT GTGATCCTTA CTCTAAAAGA TTATGGAGAG
ATTGCCCGCA CCTATCTGAC TCCTGATGGC ACATTGAGTC AGAAAGAAGG AAGTTCAGGA
GGCAGCAATA ATGGTTAA
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| Protein sequence | MWRNKNPRAS KRQLAKGFTL IEVLVSIAIF ASLSVAAYQV VSQVQRSNAL SQERTQRLNE
IQRAMVMMDN DFRQMAMRQT RTNGEEPASQ LIFWSDYLLD SDTKGLMFAR LGWHNPQQQF
PRGEVTKVGY RLKEETLQRV WWRYPDTPVG QQGIVTPLLT QVESFDMRFY DGKQWKKEWD
DEKSLPKAVS VILTLKDYGE IARTYLTPDG TLSQKEGSSG GSNNG
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