| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001874 |
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| Symbol | |
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| ID | 8555503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 265316 |
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| End bp | 267637 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 646404867 |
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| Product | transcription accessory protein |
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| Protein accession | YP_003284502 |
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| Protein GI | 262392648 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAG CTATCTGTCG TATGATTGCT CAAGAACTGA ATGTTCGCCC TGAGCAAGTC
AACGCCGCTG TCACCCTAAT TGATGACGGT AACACCGTCC CTTTTATTGC ACGTTACCGC
AAAGAGGTGA CGGGTGGCCT TGATGATACC CAACTGCGTA CTCTGGACAG CCGTCTGTCT
TACCTTCGTG AAATGGATGA CCGCCGTCAA ACCATTCTCA AATCGATCCA AGAGCAAGGC
AAACTGACGC CTGAGCTTGA GCAAGAAATT ATTCAAGCCG ATAGCAAGAC TCGTCTTGAA
GACCTTTACT TACCTTACAA ACCTAAACGC CGCACTAAAG GCCAAATCGC CATTGAAGCC
GGCTTAGAAC CGCTAGCTGA CATGCTGTGG AATAATCCGC AAACCGAGCC AGAAAGCGAA
GCAAGTAAAT ATCTTGATGC CGACAAAGGC ATCACAGATA CCAAAGCCGC CTTAGACGGT
GCCCGTGCGA TCATCATGGA ACGCATTGCT GAAGACGCAA ACTTACTGGA AAAAATCCGT
AACCACTTAA ATCGTAATGC GGAACTTGTC TCACGAGTCG TTGAAGGAAA AGAGCAAGAA
GGTGAGAAGT TCAAAGATTA CTTCAATCAC AACGAACCGC TGAGCAAAGT CCCTTCTCAC
CGTGCACTTG CGATGTTGCG CGGCCGCAAT GAAGGCTTCC TGACTTTAGC CATGAACGCT
GACCCAGAGC AGGAAGAAGG TGCTCGCCAA TCTTACTGTG AAACCATCAT TGCCGACCAT
TATGGTGTAA CGTTAAGTAG CGCACCAGCA GATGCATGGC GCAAACAAGT GATCAGCTGG
GCATGGCGCA TCAAGGTATC GATGCACATG GAAACCGAAT TGATGGGCGC AATGAAAGAG
CGTGCTGAAA TTGAAGCGAT TGAAGTATTT GCGACTAACC TAAAAGATTT GTTAATGGCG
GCGCCGGCAG GTCCTCGCGC AACACTTGGT CTCGATCCTG GCCTGCGTAC CGGTTCAAAA
ATCGCGGTTG TCGATTCAAC GGGTAAAGTT CTGGCTACGG AAACCATCTA CCCTCACCCT
CCGCAAAAAC AATACGACAA ATCAGCGCAA ATCGTTGACC AGTTAGTGCG TAAGTACAAC
GTGGATTTAA TTGCGATTGG TAACGGCACG GCTTCTCGTG AAACCGATAG CTTTGTCGCA
GACGTAATCA AACGCGGCAA CCTAAAAGTT CAGAAAATCA TCGTCAGCGA AGCAGGCGCA
TCGGTGTACT CGGCCTCTGA ACTCGCAGCG AAAGAGTTCC CGAATATGGA CGTATCACTG
CGTGGTGCAG TGTCGATTGC GCGTCGTTTG CAAGATCCAT TGGCTGAGCT CGTGAAAATC
GATCCGAAAT CGATCGGTGT GGGTCAATAC CAGCACGATG TAAGCCAATC TATGTTGGCA
AAACGCCTAG ATGCGATTGT GGAAGACTGT GTAAACGCGG TTGGCGTTGA TGTGAACACG
GCTTCTGCCG CACTATTAAC GCGCGTAGCA GGCTTATCAA GCACCATCGC GCAGAACATT
GTCGACTTCC GCGACGAAAA TGGCCGCTTC GAAGCACGTA CGACGTTGAA GAAAGTACCT
CGCTTGGGTC CTAAAGCGTT CGAACAGTGT GCGGGCTTCC TACGTATTAT GGACGGCAAG
AACCCACTTG ATGCTTCAGC AGTCCACCCG GAAGCATACC CAGTAGTCAA AGCAATTGCT
GAGAAAAACA GCAAAGACAT CAAGGCACTG ATTGGTGACT CAGCATTCCT CAAAGGCTTA
CACGCTGTGG ACTATACCGA TGAACACTTT GGTGTCCCAA CGGTTACCGA TATCATCAAA
GAGCTGGATA AACCGGGTCG TGACCCACGT CCTGAATTCA AGACCGCTAC GTTTGCAGAA
GGCGTAAACT CAGTTTCTGA TCTAGAACCG GGCATGATCC TAGAAGGCGT GGTCTCGAAC
GTAGCCAACT TTGGTGCCTT CGTCGATATC GGTGTTCACC AAGATGGTCT GGTCCACATT
TCTGCGCTGA CTGACCGCTA TGTTTCTGAT CCACGTGAAG TCGTGAAAGC AGGTGACATC
GTCAAAGTAA AAGTGATGGA AGTGGACGTA CAGCGTAAGC GTATTGGTCT ATCGATGCGT
ATGAAAGACG AACCGGGTCA AGATAACCGA AGCCAACGCT CTTCAGCCGC ACCGCGTCGT
AATGACCAAG CACAACGTCG TCAGCCTCGC CGCGATGAGT CTTCATCGAA CAGTGCAATG
GGCGGTGCTT TTGCGGCAGC GTTTGCTAAA GCGAAAAAGT AA
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| Protein sequence | MSQAICRMIA QELNVRPEQV NAAVTLIDDG NTVPFIARYR KEVTGGLDDT QLRTLDSRLS
YLREMDDRRQ TILKSIQEQG KLTPELEQEI IQADSKTRLE DLYLPYKPKR RTKGQIAIEA
GLEPLADMLW NNPQTEPESE ASKYLDADKG ITDTKAALDG ARAIIMERIA EDANLLEKIR
NHLNRNAELV SRVVEGKEQE GEKFKDYFNH NEPLSKVPSH RALAMLRGRN EGFLTLAMNA
DPEQEEGARQ SYCETIIADH YGVTLSSAPA DAWRKQVISW AWRIKVSMHM ETELMGAMKE
RAEIEAIEVF ATNLKDLLMA APAGPRATLG LDPGLRTGSK IAVVDSTGKV LATETIYPHP
PQKQYDKSAQ IVDQLVRKYN VDLIAIGNGT ASRETDSFVA DVIKRGNLKV QKIIVSEAGA
SVYSASELAA KEFPNMDVSL RGAVSIARRL QDPLAELVKI DPKSIGVGQY QHDVSQSMLA
KRLDAIVEDC VNAVGVDVNT ASAALLTRVA GLSSTIAQNI VDFRDENGRF EARTTLKKVP
RLGPKAFEQC AGFLRIMDGK NPLDASAVHP EAYPVVKAIA EKNSKDIKAL IGDSAFLKGL
HAVDYTDEHF GVPTVTDIIK ELDKPGRDPR PEFKTATFAE GVNSVSDLEP GMILEGVVSN
VANFGAFVDI GVHQDGLVHI SALTDRYVSD PREVVKAGDI VKVKVMEVDV QRKRIGLSMR
MKDEPGQDNR SQRSSAAPRR NDQAQRRQPR RDESSSNSAM GGAFAAAFAK AKK
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