Gene VEA_001872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001872 
Symbol 
ID8555501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp262597 
End bp263088 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content45% 
IMG OID646404865 
Producttranscription elongation factor GreB 
Protein accessionYP_003284500 
Protein GI262392646 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01461] transcription elongation factor GreB 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.790868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAACTA AGCTGATTAC CCGTGAAGGT TATAACAAAC TCAAACAAGA GCATGATTAC 
CTTTGGAATG AAAAGCGTCC TGAAATCACC AAAATCGTCA CTTGGGCGGC GAGCCTGGGC 
GATCGCTCAG AAAATGCGGA TTACACCTTC AACAAACGTC TGCTTCGTCA GATCGATCGT 
CGTGTTCGAT TTCTTCGCAA GTTTCTGCCT GAAGTCACGA TCGTTGACTA TTCTCCGCAG 
CAAGAAGGCA AAGTCTTTTT TGGTGCTTGG GTTGAAATAG AAAATGAGGC TGGAGAGGTG 
AAGAAGTTCC GCATTGTTGG GCCTGAAGAG ATTTATGGAG ATGCGAAAGA CTACATCTCT 
ATCGATTCAC CTATGGCGCG AGCGATGTTG AAAAAACAAG TGGATGAAGA ATTCACGGTG 
CGAACCCCAG AAGGTGAAAA AGAGTGGTTC ATTAACTCGA TTGAATACAA CAAACCAGCC 
TTGGAAGACT GA
 
Protein sequence
MKTKLITREG YNKLKQEHDY LWNEKRPEIT KIVTWAASLG DRSENADYTF NKRLLRQIDR 
RVRFLRKFLP EVTIVDYSPQ QEGKVFFGAW VEIENEAGEV KKFRIVGPEE IYGDAKDYIS 
IDSPMARAML KKQVDEEFTV RTPEGEKEWF INSIEYNKPA LED