| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001870 |
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| Symbol | |
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| ID | 8555499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 261247 |
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| End bp | 261966 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 646404863 |
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| Product | two-component system response regulator OmpR |
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| Protein accession | YP_003284498 |
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| Protein GI | 262392644 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.360284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGAAA ATCATAAAAT TTTAGTGGTT GATGACGATG CTCGTTTACG TGCTCTATTG
GAGCGTTACC TTTCTGAGCA AGGTTTTCAG GTCCGAAGTG TCGCCAATGG CGAACAGATG
GATCGCCTAC TAACGCGCGA AAACTTTCAC TTAATGGTGC TGGACCTAAT GTTACCAGGT
GAAGACGGTT TGTCGATTTG TCGTCGTCTA CGCCACGCGA ACAACATGCT GCCAATCTTA
ATGCTCACCG CGAAAGGTGA TGAAGTGGAC CGCATTGTGG GTCTGGAAGT GGGGGCGGAT
GATTATTTGC CAAAACCATT TAACCCACGT GAATTACTCG CTCGCATTAA AGCCGTACTA
CGCCGTCAAA CCGTAGAGTT GCCGGGCGCG CCAAGTACCG AAGAAAAAGT AGTGGAGTTT
GGTGAGTTCC GACTCAATCT AGGCACTCGC GAGATGTTCC GCGGTGACGA GGCAATGCCA
CTGACCTCAG GAGAGTTTGC TGTCCTGAAA GCGCTCGTGA CGAATGCGCG AGAGCCGATG
TCACGAGACA AATTGATGAA CATGGCACGT GGCCGTGAAT ATTCTGCGAT GGAACGTTCT
ATTGACGTGC AAATCTCACG TTTGCGTCGC ATGTTAGAAG ACGATCCGAG CAAGCCACGC
TACATTCAAA CCGTGTGGGG GTTAGGTTAC GTTTTCGTCC CAGACGGCAA AGAGGTGTAA
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| Protein sequence | MQENHKILVV DDDARLRALL ERYLSEQGFQ VRSVANGEQM DRLLTRENFH LMVLDLMLPG
EDGLSICRRL RHANNMLPIL MLTAKGDEVD RIVGLEVGAD DYLPKPFNPR ELLARIKAVL
RRQTVELPGA PSTEEKVVEF GEFRLNLGTR EMFRGDEAMP LTSGEFAVLK ALVTNAREPM
SRDKLMNMAR GREYSAMERS IDVQISRLRR MLEDDPSKPR YIQTVWGLGY VFVPDGKEV
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