| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001851 |
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| Symbol | |
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| ID | 8555480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 238304 |
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| End bp | 239161 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646404844 |
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| Product | oligopeptide transport ATP-binding protein OppD |
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| Protein accession | YP_003284479 |
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| Protein GI | 262392625 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACG ATGTAATCCT AAGTGTTAAA GATCTCGAAG TTGAATTCAC CACCGATGAT
GGACCAGTGA AGGTGCTGCA TGGTGTGAAC TTTGATGTGA GAGCTGGACG TACACTCGGT
CTGGTGGGAG AGTCAGGCAG TGGTAAGAGC GTAACCTCAA TGTCGATCAT GGGGCTTTTA
CCTAAGCCAT ATGGCAACAT CATCAAAGGT GAAGTGAATT ATCGCGGCAC CAACCTAGTT
GATTTGCCTG CGGAAGAGAT GTACGCCATG CGTGGCGATC GCATTTCGAT CATCTTCCAA
GATCCGATGA CGGCGCTCAA TCCAGTACAC ACTATTGGTC GCCAAATATG TGAAGTGCTT
GAACTTCATC GACCTGAGCT CGACAAAAAG GAGCGGGAGG CTTTCTCGAT TGAGATGCTG
GCAAAAGTCA AAATCCCAAT GCCAGAGAAA CGATTGAATG AGTATCCCCA TAACCTATCT
GGCGGTATGC GCCAGCGTGT CATGATCGCG ATGGCGTTGG CCTGTAAGCC GGATATTCTT
ATTTGTGATG AACCGACTAC GGCGTTGGAT GTTACGGTTC AGGCGTCTAT CCTTGAACTG
ATGAATGAGC TTCAGGAAGA AACAGGCATG GCGATGATCT TCATTACTCA CGACCTCGGG
GTTGTGGCAG AAGTGTGTGA TGATGTTGCC GTGATGTATG GTGGGCGTAT TGTCGAAAAA
GCAGAAATTT TTGAGTTGTT TGATAACCCG CAGCACCCAT ACACAGAGCG TTTAATGGGA
TTGATGCCGA GCTTAGATAA TGAGCCGAAG CAGATGATCG ATATCAAGCC TATTGATGCC
AGTATGTTTG CCAGTTAA
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| Protein sequence | MENDVILSVK DLEVEFTTDD GPVKVLHGVN FDVRAGRTLG LVGESGSGKS VTSMSIMGLL
PKPYGNIIKG EVNYRGTNLV DLPAEEMYAM RGDRISIIFQ DPMTALNPVH TIGRQICEVL
ELHRPELDKK EREAFSIEML AKVKIPMPEK RLNEYPHNLS GGMRQRVMIA MALACKPDIL
ICDEPTTALD VTVQASILEL MNELQEETGM AMIFITHDLG VVAEVCDDVA VMYGGRIVEK
AEIFELFDNP QHPYTERLMG LMPSLDNEPK QMIDIKPIDA SMFAS
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