| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001833 |
|---|
| Symbol | |
|---|
| ID | 8555462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 222919 |
|---|
| End bp | 224202 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 646404826 |
|---|
| Product | DNA-cytosine methyltransferase |
|---|
| Protein accession | YP_003284461 |
|---|
| Protein GI | 262392607 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0270] Site-specific DNA methylase |
|---|
| TIGRFAM ID | [TIGR00675] DNA-methyltransferase (dcm) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAGTA AACTTACAAC ATTAAATTTC AATTCGTTTT TTGCTGGTAT TGGTGGGTTT
GACTTAGCCT TCGAAAATCA AGGGTTTGAG CCAAGCTTTC AGTGTGAGTT GAATGCATTT
TGTCAAAGTG TACTCAAAAA GCATTGGGGT AGGGTCCCAT TGCACGGAGA TATTTCCAAC
TTAGACGCAA GTGAGATTCC TAAAGCTACA GTTTGGTGTG GAGGATTTCC GTGTCAAGAT
CTGTCTGTTG CACGAGGCTC CAAAGGAAGG CAAGGGTTAC GCGGAAGTAA TTCTGGTTTG
TTCTATCCAT TTTTTGATTT GATAGCATCA CATAAACCCG AAGCTGTTGT CATTGAAAAT
GTTGTAGGTT TGCTCAGTTC TCATAACGGT CAAGACTTTA GGATTATTTT AGAAAAGCTT
ACTAGCATTG GGTATGCTGT TGCTTGGCGT GTTGTAAATA GCCGCTTTTT TGGTGCGCCT
CAATCGAGGC CAAGAGTTTT TATTTGCGCT TTTAGAGGAA ACCCCCTTAA AGCATTCTCA
ACTTTGTATG AAACTGGGGT AGGTACTAAA CCAAAAGATC TGAGGCGAGC ATTTTTGGAC
GTTAGTGAAT GCAGTAAAAG CAAAGCTAAA GTAGCGCAAA TAGCATATTG TTTGGCTGCT
ACTTCTGGTC GGCATACTGG CACAGATTGG AGTCGTACGT ACGTTTCTTA CCCTGATGCC
GTCAGGCGAT TGACTCCGTC AGAATGTGAA GGGATTCAAG GTTTTCCTAA AGACTGGACT
TTGTTGAATC ATGAAAGAGC GACTGACTCA GATACAGAAC GTTATCATGC TTTAGGGAAT
GCAGTGTCTG TTCCTGTTGT CGAATGGGTC GCCCGACGTT TAAAGCAAGA AATTACAGGG
GAAAAGAAAC CTGTGACTAG TCAAAATATG ATACGTCATT TGCTCATGAG TCACGGTCCA
GTATTGGAAA AGTTTAGAGA GCAAAATCAC GTAAATTTAG TTTTAGATCC AACAGATAAA
GAACATAAAT TAAAATGGAT GTCTGGTGGT ATAGCGTTCG ATGATAAATG TATAGACTTC
AAGGCCACAG ACTACCCAGA GACAATAATT CCTTCAAAGC TAATAGATGT TATCGACAAG
TCCACTAACT TAGATGAAAA ATACTATATT AGTTCAAATG CTGCAGAAGG AATACTTCGT
AGAGTAAAAA GTCAAAATAG AAGCCTATTT GGGCCACTAT ATGATGCTCT GCTTGTAATG
GCAAAAGGCA GAGAAGCTGC TTGA
|
|---|
| Protein sequence | MVSKLTTLNF NSFFAGIGGF DLAFENQGFE PSFQCELNAF CQSVLKKHWG RVPLHGDISN
LDASEIPKAT VWCGGFPCQD LSVARGSKGR QGLRGSNSGL FYPFFDLIAS HKPEAVVIEN
VVGLLSSHNG QDFRIILEKL TSIGYAVAWR VVNSRFFGAP QSRPRVFICA FRGNPLKAFS
TLYETGVGTK PKDLRRAFLD VSECSKSKAK VAQIAYCLAA TSGRHTGTDW SRTYVSYPDA
VRRLTPSECE GIQGFPKDWT LLNHERATDS DTERYHALGN AVSVPVVEWV ARRLKQEITG
EKKPVTSQNM IRHLLMSHGP VLEKFREQNH VNLVLDPTDK EHKLKWMSGG IAFDDKCIDF
KATDYPETII PSKLIDVIDK STNLDEKYYI SSNAAEGILR RVKSQNRSLF GPLYDALLVM
AKGREAA
|
|---|
| |