Gene VEA_001829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001829 
Symbol 
ID8555458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp217871 
End bp219088 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content45% 
IMG OID646404822 
Productintegrase 
Protein accessionYP_003284457 
Protein GI262392603 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.854488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCAGT TAACAGTTAA GAAAGTGGAA GCATTAATTA AAACTAGTGG GGATAAAACA 
AAGCGCTATG GTGATGGTGG TGGTTTGTAT TTGGTTGTTC CCCATTCTGG CTATCCTAGC
TGGATGCTAC GTTTCACATC TAACAAAAAG CGCCGCGAAA TGACACTCGG CAAAGTCAGT
GACATATCTT TGCGTGACGC CCGACTCCTA GCTGCCGAAA AAATGAAACA AGTCCGTGAA
GGGTTTGATC CGCTTATACA ACGCAAGCGC GCAGAGCAAG AAAAAATAAA AACCGTTAAC
GACTTATTTT CAGACTGGTA TCCATCCCTA GAAAAACGTT TGAAGCACCC TAACATTCCT
AAACGTGTCT TCTTAAAAGA TATTGCCCCT CATATCGGCG CTATCCCGCT TGAGCAAGTC
AACGCTCGTG ATATTCGTAC CACTATTAAT GCCATTACTG CTGCTGGCAA ACCCGCAATT
GCGAATGACG CCCTTAACTA TTGTAAACAA CTGTTCAACC ATGGAATGAA GCTCGACCTC
ATGCAAGGTA ATCCTGCTTC TGCATTTACG GTTCGGGATG CTGGCGGTGT GGAAAAGAGC
AGAGATAGAG CCTTAACTAC CGAAGAGCTC AAGCAGTTTT TTAATACCGC TAAACAAAAC
CCGATGAGCT TTACCCGTGA CAACTATTTA GCATGCGCCT TACTAGTGTG CTTAGGTGTG
CGTAAATCCG AGCTGTGCGA AGCCAGATGG GAAGAGTTTG ATTTAGAAAA AGCAGTGTGG
GAACTCCCAA AAGAACGCAG CAAAACCAAT GTCGCTCTTA CTATCCCTTT AGCGACACCA
GTATTAGAAT GGCTTGAAGA ACTGAAAGTG AGAAGCTTAG TCTCTGACTA TGTATTCCCT
AGTCGCCGAT CCAGTAAAAA TCCACATATG GGGACAGATA CGCTTAATCG TGCGATTACC
AAACTATTCG GACATGAACC TGGTAAAAAG AAACAGCCGC CAAATCTTAT GGGGGATATG
CCTCGCTTTA CTGTTCATGA CCTACGCCGT ACGTGCCGAA CCTTATTGGC ACAACAAGGC
ACCCCCGGCC ATGTGGCCGA GAGGTGCTTG AATCACAAGT TAAAAGGTGT TGAAGGGATT
TATGATCGAC ATGATTATTT TGAAGAGCGG AGAGAGGCTT TAGATAAACT AGCATGGCAA
ATTGCTACCT TTACTTAA
 
Protein sequence
MSQLTVKKVE ALIKTSGDKT KRYGDGGGLY LVVPHSGYPS WMLRFTSNKK RREMTLGKVS 
DISLRDARLL AAEKMKQVRE GFDPLIQRKR AEQEKIKTVN DLFSDWYPSL EKRLKHPNIP
KRVFLKDIAP HIGAIPLEQV NARDIRTTIN AITAAGKPAI ANDALNYCKQ LFNHGMKLDL
MQGNPASAFT VRDAGGVEKS RDRALTTEEL KQFFNTAKQN PMSFTRDNYL ACALLVCLGV
RKSELCEARW EEFDLEKAVW ELPKERSKTN VALTIPLATP VLEWLEELKV RSLVSDYVFP
SRRSSKNPHM GTDTLNRAIT KLFGHEPGKK KQPPNLMGDM PRFTVHDLRR TCRTLLAQQG
TPGHVAERCL NHKLKGVEGI YDRHDYFEER REALDKLAWQ IATFT