Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001817 |
Symbol | |
ID | 8555446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 207108 |
End bp | 207917 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646404810 |
Product | formamidopyrimidine-DNA glycosylase |
Protein accession | YP_003284445 |
Protein GI | 262392591 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000220306 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGAGT TGCCAGAAGT TGAAGTCAGT CGTATGGGGA TTAGCCCCCA CATGGTTGGA CAAACGATCC AGTCGTTTAC TTTTCGAACG CCTAAATTGC GCTGGGATAT TCCTATAGAG CTTAAAAAAT TGGAAGGGCA GGTGATCCGT GCGATTAGCC GTCGCGCAAA ATACTTACTG ATCGAGACAA ACACAGGTAC AGCCATTGTT CACTTGGGCA TGTCGGGGTC TTTACGTGTC CTAGATGCCG ACTTTCCGCC AGCAAAGCAC GATCATGTGG ATCTCAAACT AAGCAGTGGA AAAATACTGC GTTATAACGA TCCGCGTCGT TTTGGGGCAT GGCTGTGGTG TGCTCCTGGC GAGTCACATG CTGTACTAGC AAACATGGGG CCTGAGCCTT TAACTGAAGA GTTCAATGCG GAATATGTAG CGGAGAAAGC TAAAAATAAG CGTGTCGCCG TCAAGCAGTT CATCATGGAC AACAAAGTCG TGGTTGGTGT CGGGAACATC TACGCGAATG AGTCGTTGTT TAAATCTCGA ATTCACCCTT CAAGGCCTGC AGGTAAGCTG ACTTCTCAAG AGTGGGGGGG ACTTGTTGAA AATATCAAAA TGACACTTGA GATTGCCATT ACGCAAGGTG GGACTACGCT GAAAGATTTT GCGCAAGCCG ATGGAAAGCC GGGTTACTTT GCACAAGAGT TACTAGTTTA CGGAAAAGCC GGAGAGCCAT GCCCAGAGTG CGGCGAACGA CTTCAAGAGC TAAAAATAGG GCAGCGTAAT ACCTTCTTTT GTAGTGAGTG TCAGAAATAA
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Protein sequence | MPELPEVEVS RMGISPHMVG QTIQSFTFRT PKLRWDIPIE LKKLEGQVIR AISRRAKYLL IETNTGTAIV HLGMSGSLRV LDADFPPAKH DHVDLKLSSG KILRYNDPRR FGAWLWCAPG ESHAVLANMG PEPLTEEFNA EYVAEKAKNK RVAVKQFIMD NKVVVGVGNI YANESLFKSR IHPSRPAGKL TSQEWGGLVE NIKMTLEIAI TQGGTTLKDF AQADGKPGYF AQELLVYGKA GEPCPECGER LQELKIGQRN TFFCSECQK
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