| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001816 |
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| Symbol | |
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| ID | 8555445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 206300 |
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| End bp | 207061 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 646404809 |
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| Product | LPS biosynthesis glycosyltransferase |
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| Protein accession | YP_003284444 |
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| Protein GI | 262392590 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3306] Glycosyltransferase involved in LPS biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00205752 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTAATAA TTATGGGGGT AGATACTATA TTGAGCTGCA CTAAATCAGC TGAGGGTTTA
ACGGTGGAAC TAAGCAGTAA TACACCATTG AAAGTGTTTG TTATTACAAC TGGAAATGAA
GAGCGAGTAA ATCGCATTCA AAATTACCTA AAGGGTATCG ATTTTGAATT TGTTTACTCA
GATTCTTATG ATGATCTTCT TAAGCTAGAG AAAGAGTATG AAAGTTACTC TCATAAGTTT
CGCCAAAAAG CGATCATGGC TGGAGAGATT GGTTGTTTTA AGACACACTC TCAAGCATGG
GAATTGATTG TTGCGTCTGG AACGCCTGCG ATTGTTCTTG AAGACAATAT TGAGTTCATC
GGTGAAGCAT CAAGATTACT TGCTGATGAC GTACTATCTT ATATCCAAAG TTGTGGCTTA
GTGAATTTTA CTAACTTCTG CTACATTTTA GACCCAGAAA AACCTTTTAA AATATCAGAT
GTAAAAGAAA AGAAGCCGTT TCCAACTGTG TGTTATGGCA TTACACCATT GAGAGCTAGA
GATCTATTAA GCAGCATGAG AAAAACGGCT TATGCTGTGC CAATTGACAA GTGGTTAGCG
ATTCCCAAAT TAAGTGGTTG TTATGGTTAC ATCAGCCCAA TAGTGGTAGC GAAAAGAGAA
GATAACCTGA CTAGTATTGC TAATAAACGT AAGGGGAAAA AGACTTTTAA TCCCCTTAAC
ATGATTCAGC GTGTTATCAA TAAAATTAAG TACAACTACT AG
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| Protein sequence | MLIIMGVDTI LSCTKSAEGL TVELSSNTPL KVFVITTGNE ERVNRIQNYL KGIDFEFVYS
DSYDDLLKLE KEYESYSHKF RQKAIMAGEI GCFKTHSQAW ELIVASGTPA IVLEDNIEFI
GEASRLLADD VLSYIQSCGL VNFTNFCYIL DPEKPFKISD VKEKKPFPTV CYGITPLRAR
DLLSSMRKTA YAVPIDKWLA IPKLSGCYGY ISPIVVAKRE DNLTSIANKR KGKKTFNPLN
MIQRVINKIK YNY
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