Gene VEA_001809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001809 
Symbol 
ID8555438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp200958 
End bp201668 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content43% 
IMG OID646404802 
Product3-deoxy-D-manno-octulosonic acid kinase 
Protein accessionYP_003284437 
Protein GI262392583 
COG category[T] Signal transduction mechanisms 
COG ID[COG3642] Mn2+-dependent serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAAC AGTACAAAAA CAACAACCAA GTGATATGGT TTGATGACGA GATCATTACA 
GATCCTAGCC AACCGATATT TGATGCGGAA TACTGGCAGT CCTTAGACAA GGTGGTTGGC
AGTGCGACGG GACGAGGCAC GACATGGTTT ATCCAACTAG AGAACATGCA AGCGGCACTG
CGTCATTACC GTCGTGGCGG TTTGTTTGGG AAGTTAGTTA ACGATCATTA TTGGTTCTCT
GGCTGGGATA ACACCCGTTG TGCGCAAGAG TTTCAGCTTT TGTTGGCGCT AATTGAGGCT
GGGGTGCACG TTCCTCGTCC TATTGCAGCA AGAGCCGTAA AGTCAGGACT CTTCTATCAA
GCTGATTTAT TAAGTGAGCG AATCCCAAAC GCCAGAGATC TGGTTAGTAT CTTGCAAGAA
CAGTCTTTAT CGGTAGAAAT GTATCAGAAA ATAGGGCAAG AAATTGCCAA GATGCATCAG
GTTGGCGTTA ACCATACCGA TTTGAATATC CACAATATCT TGATCGACGA CAAAGATAAG
GTATGGATTA TCGATTTTGA TAAGTGTCGT TTTGAAACTT CTGGTGACTG GAAGCATCAA
AATCTAAATA GACTTCTGCG TTCATTTAAT AAAGAGCGTG TAAAGCGACA GATTATTTGG
CAAGAGTCAG ATTTTGAGCG TTTGCAGGAC GGTTACGCTT CTCAAATTTA A
 
Protein sequence
MTQQYKNNNQ VIWFDDEIIT DPSQPIFDAE YWQSLDKVVG SATGRGTTWF IQLENMQAAL 
RHYRRGGLFG KLVNDHYWFS GWDNTRCAQE FQLLLALIEA GVHVPRPIAA RAVKSGLFYQ
ADLLSERIPN ARDLVSILQE QSLSVEMYQK IGQEIAKMHQ VGVNHTDLNI HNILIDDKDK
VWIIDFDKCR FETSGDWKHQ NLNRLLRSFN KERVKRQIIW QESDFERLQD GYASQI