| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001792 |
|---|
| Symbol | |
|---|
| ID | 8555421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 183187 |
|---|
| End bp | 184128 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 646404785 |
|---|
| Product | ADP-L-glycero-D-manno-heptose-6-epimerase |
|---|
| Protein accession | YP_003284420 |
|---|
| Protein GI | 262392566 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCATCG TAACTGGTGG CGCTGGCATG ATCGGCAGCA ACATTGTTAA AGCACTAAAC
GAAGCAGGTA TTAACGATAT CCTGATTGTC GACAACCTAA AAAATGGCAA AAAGTTTAAG
AACTTAGTTG ATCTGGACAT CACAGATTAC ATGGATCGTG ACGACTTTCT GACCCAAATT
ATGGCGGGCG ATGATTTTGG TCCGATTGAG GCAATTTTCC ACGAAGGTGC TTGCTCTGCA
ACGACTGAGT GGGATGGTAA GTACATGATG CTAAACAACT ACGAGTACTC TAAAGAGCTG
CTTCATTACT GTTTAGATCG CGAGATTCCA TTCCTATACG CTTCTTCAGC AGCCACTTAC
GGCGATACAG ATACTTTCGT TGAAGAACGC GAATACGAAG GTGCACTGAA TGTATACGGT
TACTCGAAAC AGCAGTTTGA TAACTACGTT CGTCGCCTAT GGCAAGACGC TGAAGAACAT
GGTGAGACCC TTTCTCAAAT CACCGGCTTC CGCTACTTCA ACGTATATGG CCCACGTGAA
GACCACAAAG GTAGCATGGC ATCAGTTGCG TTCCACCTCA ACAACCAACT TAACGCAGGT
GAAAATCCTA AATTGTTCGC GGGCAGCGAA TCATTCAAAC GCGACTTCGT TTACGTTGGT
GATGTCTGTA AAGTAAACCT GTGGTTCTTA GAAAACGGCG TATCAGGCAT TTTTAACTGT
GGTACTGGCC GTGCTGAATC TTTTGAAGAG GTAGCAAAAG CAGTTATCAA GCATCATGGC
AAAGGCCAAA TTGAAACCAT CCCATTCCCT GAGCACCTAA AAGGCGCTTA CCAAGAATTC
ACACAAGCGG ATCTGACCAA ACTGCGCACC GCAGGCTGTG ATGTTGAATT CAAGACAGTT
GCAGAAGGCG TTGCCGAATA CTTGACTATC CAAAACAGTT AA
|
|---|
| Protein sequence | MIIVTGGAGM IGSNIVKALN EAGINDILIV DNLKNGKKFK NLVDLDITDY MDRDDFLTQI
MAGDDFGPIE AIFHEGACSA TTEWDGKYMM LNNYEYSKEL LHYCLDREIP FLYASSAATY
GDTDTFVEER EYEGALNVYG YSKQQFDNYV RRLWQDAEEH GETLSQITGF RYFNVYGPRE
DHKGSMASVA FHLNNQLNAG ENPKLFAGSE SFKRDFVYVG DVCKVNLWFL ENGVSGIFNC
GTGRAESFEE VAKAVIKHHG KGQIETIPFP EHLKGAYQEF TQADLTKLRT AGCDVEFKTV
AEGVAEYLTI QNS
|
|---|
| |