| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001782 |
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| Symbol | |
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| ID | 8555411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 171702 |
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| End bp | 172847 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 646404775 |
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| Product | capsule polysaccharide export inner-membrane protein |
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| Protein accession | YP_003284410 |
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| Protein GI | 262392556 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3524] Capsule polysaccharide export protein |
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| TIGRFAM ID | [TIGR01010] polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTAA ATAAAAAACA CAAAACGATC TTAAATAAGT TCTGGAAAAA TAGAAATAAT
AAACAAAGAA GTTTCATTTT AGTCGTGTTA CTTCCTACAT TTATATCACT TGTTTATTAT
ACATTTATAG CCTCAGGGCA ATATGTTGTT GAAGCTCGGT TTTCAGTTAA AGGGAACGAA
ATGCAACAGA TTGATTTACT GAGCGGCATT GCAGGTATTC CTTCTCAAGG TGGAAGTTCA
ACAGACTCTT ACATAGTTCA AGATTATATC CATTCTTTAG ATATGGTCAG AGAGGTTAAT
AAAAGAGTAT CTTTACAGCA AGTGTTTAAT CATCCAGATG CTGATTGGAT GTCATCTTTA
GGGAAACAGC CAACTCAAGT AGAGATGTTG GCTTATTGGA ATAAATTTGT CACTGCCTCT
TATGACCCTA CAACGACAAT AATCACACTT AAAGTTAGAG CATTTTCTCC GCAAGATGCT
AAAAATCTAT CAAAGGCTGT TCTTTACCAA AGTGAGATCC TAGTAAATAA TTTATCTGAG
CAAGCAAGAA AAGACGATCT CCTCTTTGCT GAAGAGGAAG TGAAAAGAGC AGAAAAGAGA
GTTGCGAATG TACGAGCTTT GATGAACGAA TTTCGGACTC AAGCTCAAGA TCTAGATCCA
AAACAGACTG CAAGTTCTAA AATGATGCTG ATAGGCGAGT TGGAGGCTCA ACTGGCAAAG
ACGCAAGCTG AACTTAGCGC TTTGACTAGT TACATGGATC CTAAAGCTCC ATCAGTTATT
AATTTAACTC GAAAGGCAAA TGCATTAACC CAGCAGATCC AAAATGAGAA AAATTCTATC
GCAGGAGATA CGGATACACA GCCTGCACTA AGTGGTGTGT TTGCAGACTA TGAGCCTTTG
GTTGTTGAGC GAACATTTGC AGAAAAAGCT TATACATCTT CATTAGCTTC TTTAGAAGCA
GCTCGCGTAG AAACCTCCAG AAAACACCGT TATCTAGCAA CTTTCGTTGA GCCAACCCTT
CCGGATGAGG CATCGGAGCC TCAGCGACTG CGTTCAATCA TTACTGTATT CTTGGCAAGT
TTAGTCAGTT GGGCGATTGG TTTACTTGGA TTAGGAATTA TCCGAGAGCA TATTGGCTGG
GTTTAG
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| Protein sequence | MKLNKKHKTI LNKFWKNRNN KQRSFILVVL LPTFISLVYY TFIASGQYVV EARFSVKGNE
MQQIDLLSGI AGIPSQGGSS TDSYIVQDYI HSLDMVREVN KRVSLQQVFN HPDADWMSSL
GKQPTQVEML AYWNKFVTAS YDPTTTIITL KVRAFSPQDA KNLSKAVLYQ SEILVNNLSE
QARKDDLLFA EEEVKRAEKR VANVRALMNE FRTQAQDLDP KQTASSKMML IGELEAQLAK
TQAELSALTS YMDPKAPSVI NLTRKANALT QQIQNEKNSI AGDTDTQPAL SGVFADYEPL
VVERTFAEKA YTSSLASLEA ARVETSRKHR YLATFVEPTL PDEASEPQRL RSIITVFLAS
LVSWAIGLLG LGIIREHIGW V
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