| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001778 |
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| Symbol | |
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| ID | 8555407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 165763 |
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| End bp | 167739 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646404771 |
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| Product | capsule polysaccharide modification protein |
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| Protein accession | YP_003284406 |
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| Protein GI | 262392552 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3563] Capsule polysaccharide export protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTAATA GGGTAGTAGT ACTATCGAGA GGAATAATCC GTATTTCGAA TCTGACAAGT
TTTTTAGGTT CAAAGCTGGT TTTGCCCATT TTTCGGTGGT TGTATAGCTG CAACGTTGTT
GTCGGGTGGG GCTTTAAAGC CACTGCAAAG CGAGCCAGAG ATTATGCTGA AAAGCATGAT
CTTACTTACG TAGCATTGGA AGATGGTTTT CTGCGTTCTA TTGGCTTAGG AGTGGCGGGC
GCGCAGCCTC TGAGTTTGGT TGTCGATGAT GTCGGCATCT ATTATGATGC AAGACAGCCA
TCGAAACTTG AAATTCTGAT CAAAGAAAGT GAAGGTTTAG GCTCTGACGA GCTTGTGCGC
AGTCGCTTAT GTATTGACGC AATTCGTCAG TATCGACTCT CGAAATACAA TCAAAGCCAG
CGTGATGAGA GTTTATTAGA AGAAAAACCC AAGGTGCTGG TCATTGATCA AACTATGGGG
GATGCTTCTG TTGAGGGGGC GCAAGCCTCT CAAGATACTT TTGTGGAAAT GCTGAAGCAT
GCTGTCGAGG CAAATCCCGA CGAAACAATT TGGGTGAAAG TTCATCCTGA TGTTGTGCAT
GGAAAGAAGA GAGGTTTTCT TTACCCTCTA CCATTTGAGC ATCCGAATAT TCGGCTGCAT
ACGGAAAAAG TAAACCCTTG GGATTTTTTA GATAGCGTTG AAAGTGTTTA TACCGTTTCC
AGTTTGATGG GATTCGAGGC GCTCTTGGCC GGAGCTAGTG TTCATTGTTT TGGTATGCCG
TTTTACGCCG GTTGGGGACT AACGCACGAT ATACAGCAAT GTCCTCGCAG AAACATTGAC
CGTTCGCTAG AACAGTTGTT TTATGCAGCA TATATACAAT ATGCACGCTA TGTAGATCCT
ATTCTTGGAG AGCGATGCGA GATTGAGCGC ATTATCAGTT ATATTGCTGA TACTCTAAAA
GTTATGGCAA AACCTTCTAG AACAGTTTCC ATATCAAACT TGTCGTGGTG GAAACAACGA
TGGATTGGTG ACTACCTGAA AGCCTGGCGG TTTGAGAAGG TGAGTTCCGA AGCGGAAGAA
ATGCTGCGCT GGGGTCGTGG GTCGTTGGAT GAAAACAGCT ATTGTATTGA AGATGGCTTT
ATCCGATCTG TAGGGTTAGG GGTGCATTTT AATCGTCCGG TATCTCTTGT GTGCGATTCG
CGTGGTATCT ACTTTGATGT CCGAGAGCCC AGCGATTTAG AGTATATGTT GGAGAACCAA
GATTGTACTG CATGGGATTG TGCGCGATCG CGGGCGTTGA TCGCTCAACT GCTGACCGCT
AACCTGACGA AATACAATGT TGGTAGCGAG TGTGCGCTTT CTTTACCTAA AGGTCGCAAG
ATCATTTTGG TGCCGGGCCA GGTAGAGTCT GATGCGTCAA TCAAGTATGG CTCACCGGAG
ACCTATCACA ACGAGGCGCT TCTTAAAGCT GTAAGGACGG CCGAGCCTGA TGCCTACATT
ATTTATAAGC CACATCCCGA TGTTTTGGTC GGCCAGCGAG ACAACGGTAA TTGGCAGGGA
GATTTCATTC ACGTAGCCGA CCATGTTGAA CCCCAGGCTT CAATGGCAAG CTTATTAGAA
ATAGTTGATG AGGTTCATAC CATGACGTCC TTAACCGGGT TTGAAGCATT GTTACGAGGC
AAGAGCGTCA CCTGTTACGG TTTACCGTTT TATGCGGGCT GGGGACTGAC TAATGATAAA
CTGAATTGTG CAAGAAGAAC GCGTTCTCAT TCGGTCGAAA GCTTGGCTTA TTTTGCCTTG
ATAGAATACC CGACTTATGT GGATCCTGTT ACGCGTCAAA CGATGACAGC AGAACAGGCG
GTGACTCGTG TAGCACAAAT GAAAGCTGGA AAAGTGCAAG TCAAAGATAC CAAGCTACAG
TTGTTACTCG CAGTGAAGAA AGCTAAAAAT ACGCTCAAGC GATTTATCCG ATCTTAG
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| Protein sequence | MCNRVVVLSR GIIRISNLTS FLGSKLVLPI FRWLYSCNVV VGWGFKATAK RARDYAEKHD
LTYVALEDGF LRSIGLGVAG AQPLSLVVDD VGIYYDARQP SKLEILIKES EGLGSDELVR
SRLCIDAIRQ YRLSKYNQSQ RDESLLEEKP KVLVIDQTMG DASVEGAQAS QDTFVEMLKH
AVEANPDETI WVKVHPDVVH GKKRGFLYPL PFEHPNIRLH TEKVNPWDFL DSVESVYTVS
SLMGFEALLA GASVHCFGMP FYAGWGLTHD IQQCPRRNID RSLEQLFYAA YIQYARYVDP
ILGERCEIER IISYIADTLK VMAKPSRTVS ISNLSWWKQR WIGDYLKAWR FEKVSSEAEE
MLRWGRGSLD ENSYCIEDGF IRSVGLGVHF NRPVSLVCDS RGIYFDVREP SDLEYMLENQ
DCTAWDCARS RALIAQLLTA NLTKYNVGSE CALSLPKGRK IILVPGQVES DASIKYGSPE
TYHNEALLKA VRTAEPDAYI IYKPHPDVLV GQRDNGNWQG DFIHVADHVE PQASMASLLE
IVDEVHTMTS LTGFEALLRG KSVTCYGLPF YAGWGLTNDK LNCARRTRSH SVESLAYFAL
IEYPTYVDPV TRQTMTAEQA VTRVAQMKAG KVQVKDTKLQ LLLAVKKAKN TLKRFIRS
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