Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001765 |
Symbol | |
ID | 8555394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 151028 |
End bp | 152203 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646404758 |
Product | 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase |
Protein accession | YP_003284393 |
Protein GI | 262392539 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000522375 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTAATA CTCCATTTTC TCCATGGCCT TCTTTTACTC AAGAAGAGGC CGATGCAGTG CGTCGTGTAC TACTGTCAAA CAAAGTAAAC TACTGGACGG GTAGTGAGTG CCGTGAGTTC GAAAAAGAAT TCGCAGCTTG GGTTGGATGT GATCATGCTG TTGCACTAAG CAACGGTACC CTTGCACTCG ATGTCGCGCT TAAAGCGTTA GCGATTGGTG AAGGGGACGA GGTCATTACG ACGCCTAGAA CGTTTCTTGC TTCTGCCTCT TCTATTGTTA CGGCTGGCGC CAATCCTGTG TTCGCGGATG TGGATCTCAA TAGCCAAGCC ATCACGGCTG AGTCGATTGA AGCGGTGCTA ACCCCTAAGA CGAAAGCGGT CATTGTTGTT CATTTAGCTG GCATGCCTGC AGAAATGGAT GCCATTATGG CACTTTCAGA AAAACATGGT TTTTCTGTTA TTGAAGATTG TGCCCAAGCA CATGGCGCAA AATACAAAGG GCGCAGTGTA GGCACAATTG GTCACATTGG TGCTTGGTCT TTCTGTCAAG ATAAGATCAT GACCACAGGC GGTGAAGGTG GCATGGTGAC CACAAATGAT AAAGATTTGT GGTCAAAAAT GTGGTCTTAC AAAGATCATG GTAAAAACTA TGACGCGATT TATAACCGTC AACATCCACC GGGCTTTCGC TGGTTGCACG ACAGCTTTGG AACCAACTGG CGTATGACTG AGCTACAAGC CGTGGTTGGT CGTATTCAAT TGACTCGCAT GTCAGAATGG ACGGCAAAAC GTCAAGCCAA TGCGGCACAA ATCGATGAGG CGGTTGCAGA TCTCAATATC GTTCGCCGTG TTCACGTGCC TGAGCATTCG CAGCACGCAG AATACAAACA CTACCTATTT GTTGAGCCTA AACATTTGGC AGAGGGCTGG ACGAGAGATC GCATTGTGGA AACCATTGTA GAACGTGGCG TTCCGGCTTA TCAGGGGAGC TGTTCTGAGG TGTATTTAGA AAAAGCATTT GATAATACGC CATGGCGACC AGAAAAACGC CTACCAAATG CGGTGCAGTT AGGTGAGACT AGTTTGATGT TTTTGGTCCA TCCGACATTA ACACCAGAAG AAGTGGCTAA AACCAGCTGC GTGATCCGTG AAGTGTTGTT AGAGGCGCAG AAGTAA
|
Protein sequence | MLNTPFSPWP SFTQEEADAV RRVLLSNKVN YWTGSECREF EKEFAAWVGC DHAVALSNGT LALDVALKAL AIGEGDEVIT TPRTFLASAS SIVTAGANPV FADVDLNSQA ITAESIEAVL TPKTKAVIVV HLAGMPAEMD AIMALSEKHG FSVIEDCAQA HGAKYKGRSV GTIGHIGAWS FCQDKIMTTG GEGGMVTTND KDLWSKMWSY KDHGKNYDAI YNRQHPPGFR WLHDSFGTNW RMTELQAVVG RIQLTRMSEW TAKRQANAAQ IDEAVADLNI VRRVHVPEHS QHAEYKHYLF VEPKHLAEGW TRDRIVETIV ERGVPAYQGS CSEVYLEKAF DNTPWRPEKR LPNAVQLGET SLMFLVHPTL TPEEVAKTSC VIREVLLEAQ K
|
| |